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SCNpilot_cont_500_bf_scaffold_5855

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5855_1
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(2..412)
DNA (411bp) protein (137aa)
pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococcus fermentans DSM 16532.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XT49_9CREN
SCNpilot_cont_500_bf_scaffold_5855_2
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(624..1316)
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QWR3_CHRSD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABE59095.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCNpilot_cont_500_bf_scaffold_5855_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1446..2897
DNA (1452bp) protein (484aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
allantoinase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037E630C
dihydroorotase
SCNpilot_cont_500_bf_scaffold_5855_4
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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2891..3937
DNA (1047bp) protein (349aa)
inositol 2-dehydrogenase (EC:1.1.1.18)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ9_9FIRM
Tax=RBG_13_Chloroflexi_50_21_curated
SCNpilot_cont_500_bf_scaffold_5855_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3940..4818
DNA (879bp) protein (293aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETX6_9RHIZ
Amidohydrolase 2 protein {ECO:0000313|EMBL:AJD44439.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
amidohydrolase family protein
SCNpilot_cont_500_bf_scaffold_5855_6
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4921..5964
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3BBR9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD91692.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
leucyl aminopeptidase (aminopeptidase T)
SCNpilot_cont_500_bf_scaffold_5855_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5980..6666)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037C637A
Short-chain dehydrogenase {ECO:0000313|EMBL:KJB95707.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
short-chain dehydrogenase
SCNpilot_cont_500_bf_scaffold_5855_8
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6660..7463)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000366E228
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AJX00295.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_500_bf_scaffold_5855_9
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7456..8271)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003783DEE
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KGC11033.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
ABC transporter; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_5855_10
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8264..9046)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003607BC8 rbh
ABC transporter family protein {ECO:0000313|EMBL:KGC11130.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
ABC transporter-like protein
SCNpilot_cont_500_bf_scaffold_5855_11
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9257..9547)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037673F2
NMT1/THI5 like family protein {ECO:0000313|EMBL:AJW97774.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Displaying 11 items

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