name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_2015_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..226)
|
Nitrate reductase 1, gamma (Cytochrome b(NR)) subunit {ECO:0000313|EMBL:CDX53666.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX53666.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
narI; nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Nitrate reductase, gamma subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU1_HYPSM
|
|
SCNpilot_cont_500_bf_scaffold_2015_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(241..948)
|
Molybdenum-cofactor-assembly chaperone subunit (Delta subunit) of nitrate reductase 1 {ECO:0000313|EMBL:CDX53661.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX53661.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Nitrate reductase molybdenum cofactor assembly chaperone NarJ n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU0_HYPSM
narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ; K00373 nitrate reductase 1, delta subunit
|
|
SCNpilot_cont_500_bf_scaffold_2015_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(945..1892)
|
Nitrate reductase 1, beta (Fe-S) subunit {ECO:0000313|EMBL:CDX53658.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX53658.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrate reductase subunit beta protein; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Nitrate reductase beta subunit protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWU0_AZOC5
|
|
SCNpilot_cont_500_bf_scaffold_2015_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2373..6116)
|
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:CCB66461.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CCB66461.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
narG; nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
rbh
Nitrate reductase, alpha subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCT8_HYPSM
rbh
|
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SCNpilot_cont_500_bf_scaffold_2015_5
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6145..8886)
|
Nitrite extrusion protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWT4_AZOC5
Nitrite extrusion protein {ECO:0000313|EMBL:BAF87422.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
nitrite extrusion protein; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
|
|
SCNpilot_cont_500_bf_scaffold_2015_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9206..9679
|
Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUP8_METNO
Crp/Fnr family transcriptional regulator; K13642 CRP/FNR family transcriptional regulator, transcriptional activator FtrB
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACL57116.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
|
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SCNpilot_cont_500_bf_scaffold_2015_7
unknown
|
Not on your lists |
comp(9952..10149)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_2015_8
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10390..10794)
|
UPI0003CF27C9 related cluster n=1 Tax=unknown RepID=UPI0003CF27C9
Uncharacterized protein {ECO:0000313|EMBL:ESY82203.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_2015_9
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11396..12916
|
type I site-specific DNA-methyltransferase HsdM-like protein (EC:2.1.1.72)
rbh
Type I restriction system adenine methylase HsdM n=1 Tax=Rhizobium sp. CF122 RepID=J3BMU7_9RHIZ
rbh
Type I restriction system adenine methylase HsdM {ECO:0000313|EMBL:EJL53919.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
|
|
SCNpilot_cont_500_bf_scaffold_2015_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12906..14168
|
Type I restriction-modification system subunit HsdS-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S8W2_RHIET
type I restriction-modification system subunit HsdS-like protein
Type I restriction-modification system subunit HsdS-like protein {ECO:0000313|EMBL:AGS23871.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
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SCNpilot_cont_500_bf_scaffold_2015_11
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14176..17154
|
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EDQ31786.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EDQ31786.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
type I site-specific deoxyribonuclease HsdR-like protein (EC:3.1.21.3)
rbh
Type I restriction-modification system, R subunit n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DFK8_9RHIZ
rbh
|
|
SCNpilot_cont_500_bf_scaffold_2015_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17219..17833
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E03FA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32064.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
|
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SCNpilot_cont_500_bf_scaffold_2015_13
unknown
|
Not on your lists |
comp(17672..18004)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_2015_14
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18338..19498
|
Formate dehydrogenase {ECO:0000313|EMBL:EUC12001.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EUC12001.1};; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
formate dehydrogenase; K00122 formate dehydrogenase [EC:1.2.1.2]
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Burkholderia sp. BT03 RepID=J3BML8_9BURK
|
|
SCNpilot_cont_500_bf_scaffold_2015_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19650..19751
|
Transposase IS3/IS911 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW6_XANP2
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABS70062.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_cont_500_bf_scaffold_2015_16
unknown
|
Not on your lists |
19758..19889
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_2015_17
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20613..21599
|
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036F145E
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIF33935.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
AraC family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_2015_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21695..22636
|
PAS/PAC sensor hybrid histidine kinase; K00936 [EC:2.7.3.-]
UPI0003CF66E2 related cluster n=1 Tax=unknown RepID=UPI0003CF66E2
Blue-light-activated protein {ECO:0000313|EMBL:CEL29446.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
|
|
SCNpilot_cont_500_bf_scaffold_2015_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23719..24171)
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K3_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI96835.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
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SCNpilot_cont_500_bf_scaffold_2015_20
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24171..25151)
|
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQA99588.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
virD4; type IV secretory pathway VirD4 component; K03205 type IV secretion system protein VirD4
|