ggKbase home page

SCNpilot_cont_500_bf_scaffold_2202

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2202_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..453
DNA (453bp) protein (151aa)
narI; nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Nitrate reductase, gamma subunit {ECO:0000313|EMBL:CCB66464.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CCB66464.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Nitrate reductase, gamma subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU1_HYPSM
SCNpilot_cont_500_bf_scaffold_2202_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..1364
DNA (909bp) protein (303aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWU9_AZOC5
SCNpilot_cont_500_bf_scaffold_2202_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1372..1659
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUF5_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:CDX53670.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2202_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1656..2912
DNA (1257bp) protein (419aa)
Molybdopterin biosynthesis protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUM7_TISMK
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:CDX53672.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
moeA; molybdopterin biosynthesis protein
SCNpilot_cont_500_bf_scaffold_2202_5
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2918..3913
DNA (996bp) protein (332aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWV2_AZOC5 rbh
molybdenum cofactor biosynthesis protein A rbh
SCNpilot_cont_500_bf_scaffold_2202_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3924..4451
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000363B936
Uncharacterized protein {ECO:0000313|EMBL:CDX53679.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2202_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4448..4906
DNA (459bp) protein (153aa)
Putative integral membrane protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU4_HYPSM
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:CCB66467.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_2202_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4919..6109
DNA (1191bp) protein (397aa)
NnrS protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU5_HYPSM
nnrS; NnrS protein; K07234 uncharacterized protein involved in response to NO
NnrS protein {ECO:0000313|EMBL:CCB66468.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_2202_9
unknown

Not on your lists

6401..6625
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_10
unknown

Not on your lists

6663..6797
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_11
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7004..7468)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2P1_SPHJU
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_12
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7468..8652)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2P3_9BRAD
UBA/THIF-type NAD/FAD binding fold protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_13
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8627..9370)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHH0_RHIRD
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9451..12852)
DNA (3402bp) protein (1134aa)
putative ATP-dependent DNA helicase (EC:3.6.1.-)
Putative ATP-dependent DNA helicase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N8_SPHJU
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_15
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12856..13443)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037D48FB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13440..14219)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ33_RHOPX
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Displaying 16 items

View Taxonomy