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SCNpilot_cont_500_bf_scaffold_15204

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15204_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..395
DNA (393bp) protein (131aa)
Glycine betaine/choline ABC transporter,permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQZ1_AZOBR
Osmoprotectant uptake system permease {ECO:0000313|EMBL:AIB14081.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
glycine betaine/choline ABC transporter,permease component
SCNpilot_cont_500_bf_scaffold_15204_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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392..1339
DNA (948bp) protein (316aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Serratia marcescens FGI94 RepID=L0MCP4_SERMA rbh
ABC-type proline/glycine betaine transport system, ATPase component rbh
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGB81658.1}; TaxID=1249634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens FGI94.;"
SCNpilot_cont_500_bf_scaffold_15204_3
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1336..2085
DNA (750bp) protein (250aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XC0_RHOFD rbh
binding-protein-dependent transport systems inner membrane component; K05846 osmoprotectant transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_cont_500_bf_scaffold_15204_4
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2212..2577
DNA (366bp) protein (122aa)
Alginate regulatory protein AlgP n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTD0_9SPHI
Histone H1 family protein nucleoprotein HC2 {ECO:0000313|EMBL:KIG05833.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_15204_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2595..3356)
DNA (762bp) protein (254aa)
C4-dicarboxylate transport system regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98AV0_RHILO
C4-dicarboxylate transport system regulatory protein; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Putative DNA-binding response regulator in two-component system {ECO:0000313|EMBL:CCV13792.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_15204_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3745..5553)
DNA (1809bp) protein (603aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
dicarboxylate sensor protein; K10125 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] rbh
C4-dicarboxylate transport sensor protein dctB n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FC54_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_15204_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5792..6661
DNA (870bp) protein (290aa)
C4-dicarboxylate transport protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5Q1H4_9RHIZ
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein
Displaying 7 items

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