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SCNpilot_cont_500_bf_scaffold_33476

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_33476_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_33476_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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213..1142
DNA (930bp) protein (310aa)
Putative hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QVT5_9DELT
Putative hydrolase {ECO:0000313|EMBL:EPX60783.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_33476_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1236..1892)
DNA (657bp) protein (219aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2KAX6_9RHIZ
Putative GntR-family transcription regulator {ECO:0000313|EMBL:CDN51389.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
transcriptional regulator, GntR family
SCNpilot_cont_500_bf_scaffold_33476_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1984..2772)
DNA (789bp) protein (263aa)
Putative aldolase, class 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XB22_VARPD
putative aldolase, class 2
Putative aldolase, class 2 {ECO:0000313|EMBL:AGU49524.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_33476_5
unknown

Not on your lists

3009..3326
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_33476_6
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3490..3627)
DNA (138bp) protein (46aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HXL6_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJN08698.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_500_bf_scaffold_33476_7
unknown

Not on your lists

3790..4047
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_33476_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4142..4411)
DNA (270bp) protein (90aa)
ABC transporter related protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTE4_TISMK
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AFK56032.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_33476_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4420..5007)
DNA (588bp) protein (196aa)
ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XAL3_VARPD
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU49521.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Displaying 9 items

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