ggKbase home page

SCNpilot_cont_500_bf_scaffold_9106

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9106_1
unknown

Not on your lists

comp(172..357)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9106_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

572..1900
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D0665
Uncharacterized protein {ECO:0000313|EMBL:CDX41731.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9106_3
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1904..2248)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366D364
hypothetical protein
Protein containing DUF1491 {ECO:0000313|EMBL:AEV36957.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_cont_500_bf_scaffold_9106_4
bacterium YEK0313, Bacteria

Not on your lists

comp(2273..4771)
DNA (2499bp) protein (833aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
multi-sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037214B3 rbh
SCNpilot_cont_500_bf_scaffold_9106_5
unknown

Not on your lists

5075..5254
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9106_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5299..5730
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003602617
Sulfur acceptor protein SufE for iron-sulfur cluster assembly {ECO:0000313|EMBL:ESR22764.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
SCNpilot_cont_500_bf_scaffold_9106_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5740..6513)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003753896
Uncharacterized protein {ECO:0000313|EMBL:KGD85840.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9106_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6510..6878)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362CA7D
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:EJW10134.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
DNA replication initiation ATPase
SCNpilot_cont_500_bf_scaffold_9106_9
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7074..7487)
DNA (414bp) protein (138aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI00035FB61A
Transcriptional regulator {ECO:0000313|EMBL:ERP94187.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
ROSMUCR transcriptional regulator
SCNpilot_cont_500_bf_scaffold_9106_10
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7615..8829)
DNA (1215bp) protein (405aa)
monovalent cation/H+ antiporter subunit D (EC:1.6.5.3); K05568 multicomponent Na+:H+ antiporter subunit D rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ABC22432.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABC22432.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A9374 rbh
Displaying 10 items

View Taxonomy