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SCNpilot_cont_500_bf_scaffold_42177

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_42177_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..185
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D01C3
Fur family transcriptional regulator {ECO:0000313|EMBL:KKC31562.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ferric uptake regulation protein FUR; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_42177_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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182..976
DNA (795bp) protein (265aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D1AB7
Lyso-ornithine lipid acyltransferase {ECO:0000313|EMBL:ABD89653.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_42177_3
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1237..2433
DNA (1197bp) protein (399aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. Y
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E0644
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_cont_500_bf_scaffold_42177_4
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2430..3461
DNA (1032bp) protein (344aa)
phosphate starvation protein PhoH n=1 Tax=Kaistia granuli RepID=UPI00036974E5 rbh
Phosphate starvation inducible protein {ECO:0000313|EMBL:EFO32748.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
hypothetical protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
SCNpilot_cont_500_bf_scaffold_42177_5
unknown

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comp(3395..3850)
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42177_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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3914..4897
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF149 rbh
hemolysin-like protein
Putative hemolysin-like protein {ECO:0000313|EMBL:ADZ72728.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_42177_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4975..6156
DNA (1182bp) protein (394aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CC0F2
SCNpilot_cont_500_bf_scaffold_42177_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6153..6470
DNA (318bp) protein (106aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CC0F2
apolipoprotein N-acyltransferase
SCNpilot_cont_500_bf_scaffold_42177_9
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6625..7035
DNA (411bp) protein (137aa)
Cro/Cl family transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI0003749012
Transcriptional regulator protein {ECO:0000313|EMBL:EFO32752.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
transcriptional regulator, XRE family
SCNpilot_cont_500_bf_scaffold_42177_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7342..8352
DNA (1011bp) protein (337aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S-adenosylmethionine synthetase n=1 Tax=Kaistia granuli RepID=UPI00036015B0
SCNpilot_cont_500_bf_scaffold_42177_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8349..8975
DNA (627bp) protein (209aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
trmB; putative tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371A0D2
SCNpilot_cont_500_bf_scaffold_42177_12
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9338..9934
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363DEB6
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
ribosome maturation factor rimP; K09748 ribosome maturation factor RimP
Displaying 12 items

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