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SCNpilot_cont_500_bf_scaffold_12268

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12268_1
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..704)
DNA (702bp) protein (234aa)
manganese transporter n=1 Tax=Kaistia granuli RepID=UPI000369DD97
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
manganese transporter MntH; K03322 manganese transport protein
SCNpilot_cont_500_bf_scaffold_12268_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

916..1233
DNA (318bp) protein (106aa)
Transcriptional regulator, ArsR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEP0_METS4
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGM33722.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_12268_3
unknown

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1226..1735
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12268_4
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1774..2295
DNA (522bp) protein (174aa)
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TB20_MESCW
SCNpilot_cont_500_bf_scaffold_12268_5
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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2358..3299
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C7012 rbh
Oxidoreductase protein
Oxidoreductase protein {ECO:0000313|EMBL:AFD26782.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_cont_500_bf_scaffold_12268_6
unknown

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comp(3318..3743)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037F06D6
SCNpilot_cont_500_bf_scaffold_12268_7
unknown

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comp(3819..3983)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12268_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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4103..5098
DNA (996bp) protein (332aa)
asd; aspartate-B-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
aspartate-semialdehyde dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037E3DB0 rbh
SCNpilot_cont_500_bf_scaffold_12268_9
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5117..5728)
DNA (612bp) protein (204aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C2109
SCNpilot_cont_500_bf_scaffold_12268_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5936..6748
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363052A
Uncharacterized protein {ECO:0000313|EMBL:AHF84448.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12268_11
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6759..7253)
DNA (495bp) protein (165aa)
OsmC family protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RQI5_ASTEC
osmc family protein; K07397 putative redox protein
OsmC family protein {ECO:0000313|EMBL:ADU12169.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_500_bf_scaffold_12268_12
Ochrobactrum sp. LM19, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7309..8139)
DNA (831bp) protein (277aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L3N5_9RHIZ
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:AJW29930.1}; TaxID=1449781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. LM19.;"
outer membrane autotransporter
SCNpilot_cont_500_bf_scaffold_12268_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8303..11179)
DNA (2877bp) protein (959aa)
UPI0003CEDAA4 related cluster n=1 Tax=unknown RepID=UPI0003CEDAA4
Transporter {ECO:0000313|EMBL:ESY72056.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
outer membrane autotransporter barrel domain-containing protein
SCNpilot_cont_500_bf_scaffold_12268_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11324..12115)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003789B5B
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW87643.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_12268_15
unknown

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comp(12136..12312)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 15 items

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