ggKbase home page

SCNpilot_cont_500_bf_scaffold_8238

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8238_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1192
DNA (1191bp) protein (397aa)
Pole remodelling regulatory diguanylate cyclase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PNT1_9RHOB
Pole remodelling regulatory diguanylate cyclase {ECO:0000313|EMBL:EJW12067.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
pleD; response regulator PleD; K02488 two-component system, cell cycle response regulator
SCNpilot_cont_500_bf_scaffold_8238_2
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1272..1439)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Kaistia granuli RepID=UPI00036E5693
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_cont_500_bf_scaffold_8238_3

Not on your lists

comp(1550..2725)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B8AF6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO04565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_8238_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2822..3271)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E06BD
zinc-finger protein
Zinc-finger protein {ECO:0000313|EMBL:ADZ70269.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_8238_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3345..4295)
DNA (951bp) protein (317aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2D5_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EHK52845.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_8238_6
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4292..5131)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003642295
ABC transporter permease {ECO:0000313|EMBL:KHJ55440.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
putative ribose/xylose/arabinose/galactoside ABC transporter, permease component
Displaying 6 items

View Taxonomy