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SCNpilot_cont_500_bf_scaffold_8847

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8847_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..480
DNA (480bp) protein (160aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDK7_MESAW
phospho-2-dehydro-3-deoxyheptonate aldolase
SCNpilot_cont_500_bf_scaffold_8847_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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576..1172
DNA (597bp) protein (199aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00105716};; Flags: Fragment;; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
tyrS; tyrosine-tRNA ligase TyrS (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=B6JHE4_OLICO
SCNpilot_cont_500_bf_scaffold_8847_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1261..5097)
DNA (3837bp) protein (1279aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AB90B rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ25077.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8847_4
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5608..6450
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370E0DE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV37973.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_cont_500_bf_scaffold_8847_5
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6532..7845
DNA (1314bp) protein (438aa)
Membrane protein associated metalloendopeptidase n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JEG6_9RHIZ
Membrane protein {ECO:0000313|EMBL:KEQ05971.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
metalloendopeptidase
SCNpilot_cont_500_bf_scaffold_8847_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8031..9410
DNA (1380bp) protein (460aa)
Peptidase M23B n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVQ5_RHOP2
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABD07705.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_500_bf_scaffold_8847_7
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9458..10306)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F0E77 rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
prfB; Peptide chain release factor 2 (RF-2)
SCNpilot_cont_500_bf_scaffold_8847_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10610..11227
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381D0DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54291.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_8847_9
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11182..12549)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B6E14 rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
mgtE; Mg++ transporter; K06213 magnesium transporter
SCNpilot_cont_500_bf_scaffold_8847_10
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12778..13215)
DNA (438bp) protein (146aa)
transporter n=1 Tax=Kaistia granuli RepID=UPI00038064EB
Putative uncharacterized protein {ECO:0000313|EMBL:EHP94554.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_cont_500_bf_scaffold_8847_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13229..13693)
DNA (465bp) protein (155aa)
glycosyl transferase family protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036ECA53
Penicillin-binding protein {ECO:0000313|EMBL:KIZ38826.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_500_bf_scaffold_8847_12
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13697..14305)
DNA (609bp) protein (203aa)
glycosyl transferase family protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036ECA53
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EEE47064.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
Displaying 12 items

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