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SCNpilot_cont_500_bf_scaffold_6473

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6473_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..344
DNA (342bp) protein (114aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Kaistia granuli RepID=UPI000381DB7F
SCNpilot_cont_500_bf_scaffold_6473_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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434..1516
DNA (1083bp) protein (361aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037165D9 rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SCNpilot_cont_500_bf_scaffold_6473_3
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1513..2643
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
queuine tRNA-ribosyltransferase n=1 Tax=Kaistia granuli RepID=UPI000374D5D9 rbh
SCNpilot_cont_500_bf_scaffold_6473_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2765..5371
DNA (2607bp) protein (869aa)
Putative cation transporting ATPase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIL2_MOBAS rbh
P-type HAD superfamily ATPase rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_6473_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5368..5805)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035CAA38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ70652.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_6473_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5956..6315
DNA (360bp) protein (120aa)
AsnC family transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI00036B4CCB
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADH89401.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_6473_7
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6192..7208)
DNA (1017bp) protein (339aa)
cobC; threonine-phosphate decarboxylase (EC:4.1.1.81); K02225 cobalamin biosynthetic protein CobC
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF0B4 rbh
L-threonine 3-O-phosphate decarboxylase {ECO:0000313|EMBL:EKV32787.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
SCNpilot_cont_500_bf_scaffold_6473_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7432..8100
DNA (669bp) protein (223aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E09BE rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ESZ10845.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_6473_9
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8510..9598
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A4049 rbh
Type I secretion protein TolC {ECO:0000313|EMBL:ERP98169.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
Type I secretion outer membrane protein, TolC; K12340 outer membrane channel protein
Displaying 9 items

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