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SCNpilot_cont_500_bf_scaffold_6867

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6867_1
unknown

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3..98
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000382A74E
SCNpilot_cont_500_bf_scaffold_6867_2
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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119..916
DNA (798bp) protein (266aa)
aapP; general L-amino acid transport ATP-binding subunit; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Kaistia granuli RepID=UPI000368AB65 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS11444.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCNpilot_cont_500_bf_scaffold_6867_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(930..2393)
DNA (1464bp) protein (488aa)
Citrate transporter n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0X6_STAND rbh
citrate transporter rbh
Citrate transporter {ECO:0000313|EMBL:ADH87486.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_6867_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2393..3082)
DNA (690bp) protein (230aa)
Patatin n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0X7_STAND
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ADH87487.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_6867_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3057..3476)
DNA (420bp) protein (140aa)
Patatin n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0X7_STAND
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ADH87487.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_6867_6
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3642..4691
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E8F8A
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACK50018.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_6867_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4703..6337)
DNA (1635bp) protein (545aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELL3_METSB
NADH/ubiquinone/plastoquinone
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ACK50007.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_6867_8
unknown

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comp(6334..7833)
DNA (1500bp) protein (500aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5]
NADH dehydrogenase (Quinone) n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELL2_METSB
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:CPR19292.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_cont_500_bf_scaffold_6867_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7830..8153)
DNA (324bp) protein (108aa)
NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFN7_XANP2
NADH-ubiquinone oxidoreductase chain 4L {ECO:0000313|EMBL:KFC70082.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NADH-ubiquinone oxidoreductase chain 4L; K05567 multicomponent Na+:H+ antiporter subunit C
SCNpilot_cont_500_bf_scaffold_6867_10
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8150..8869)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003621506
putative subunit of the multisubunit Na+/H+ antiporter
Putative subunit of the multisubunit Na+/H+ antiporter {ECO:0000313|EMBL:AFL73384.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
SCNpilot_cont_500_bf_scaffold_6867_11
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8972..9283)
DNA (312bp) protein (104aa)
Putative monovalent cation/H+ antiporter subunit G n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1F6_9PROT
Multiple resistance and pH homeostasis protein G {ECO:0000313|EMBL:EXI69758.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
putative monovalent cation/H+ antiporter subunit G; K05571 multicomponent Na+:H+ antiporter subunit G
SCNpilot_cont_500_bf_scaffold_6867_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9280..9561)
DNA (282bp) protein (94aa)
Multisubunit Na+/H+ antiporter, MnhF subunit n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8R4_THIV6
Uncharacterized protein {ECO:0000313|EMBL:CDH43490.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
multisubunit Na+/H+ antiporter subunit MnhF
SCNpilot_cont_500_bf_scaffold_6867_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9554..10066)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPY6_HYPDA
hypothetical protein; K05569 multicomponent Na+:H+ antiporter subunit E
Uncharacterized protein {ECO:0000313|EMBL:ADJ23870.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_6867_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10413..11528
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A52D4
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADH90929.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_6867_15
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11525..12382
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367A1C0
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACK50016.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Displaying 15 items

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