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SCNpilot_cont_500_bf_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_279_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..884)
DNA (882bp) protein (294aa)
ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W384_9ACTO rbh
ABC transporter permease rbh
ABC transporter permease {ECO:0000313|EMBL:AGZ42460.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_279_2
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(898..2124)
DNA (1227bp) protein (409aa)
Extracellular solute-binding protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXN1_MYCRH
Extracellular solute-binding protein {ECO:0000313|EMBL:EHB55215.1}; Flags: Precursor;; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
putative ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_279_3
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2325..3473)
DNA (1149bp) protein (383aa)
Thiolase {ECO:0000313|EMBL:CCM64233.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCM64233.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Thiolase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0I9_9ACTN
SCNpilot_cont_500_bf_scaffold_279_4
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3593..4480)
DNA (888bp) protein (296aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase (EC:6.3.2.6) rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE5A rbh
SCNpilot_cont_500_bf_scaffold_279_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4534..5283)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003651AEC
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
MgtC/SapB transporter {ECO:0000313|EMBL:AEA26888.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_279_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5350..5874)
DNA (525bp) protein (175aa)
GCN5-related protein N-acetyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BUT9_BEUC1
N-acetyltransferase GCN5
GCN5-related protein N-acetyltransferase {ECO:0000313|EMBL:ACQ78313.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_500_bf_scaffold_279_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5955..7394)
DNA (1440bp) protein (480aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Adenylosuccinate lyase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB65_NAKMY rbh
SCNpilot_cont_500_bf_scaffold_279_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7486..8523)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKB2_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67668.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCNpilot_cont_500_bf_scaffold_279_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8526..9041)
DNA (516bp) protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB70_NAKMY
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV81362.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_279_10
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9140..10069
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TKB4_9MICO
Permease {ECO:0000313|EMBL:KGN29129.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_279_11
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10175..10984)
DNA (810bp) protein (270aa)
hydrolase n=1 Tax=Ruania albidiflava RepID=UPI0003B39E41 rbh
Hydrolase {ECO:0000313|EMBL:KHL16049.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ymaE; hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_279_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11104..12351)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SK90_NOCSJ rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY16984.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_279_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12355..13902)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SK89_NOCSJ rbh
Putative signal peptide protein {ECO:0000313|EMBL:AJR18306.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_279_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14136..14450)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003665308
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFC85126.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
SCNpilot_cont_500_bf_scaffold_279_15
unknown

Not on your lists

comp(14447..14749)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000377D409
SCNpilot_cont_500_bf_scaffold_279_16
unknown

Not on your lists

comp(14852..15175)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_279_17
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15894..16412)
DNA (519bp) protein (173aa)
peptidase n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003807063
Peptidase {ECO:0000313|EMBL:KGM03951.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_279_18
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16685..17860)
DNA (1176bp) protein (392aa)
class I and II aminotransferase protein; K14155 cystathione beta-lyase [EC:4.4.1.8] rbh
Aminotransferase class I and II n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDP3_GEOOG rbh
Aminotransferase class I/II {ECO:0000313|EMBL:KII00049.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
SCNpilot_cont_500_bf_scaffold_279_19
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18020..18622
DNA (603bp) protein (201aa)
HAD family hydrolase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037FB5AE
HAD family hydrolase {ECO:0000313|EMBL:KDN23788.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hydrolase of the HAD superfamily
SCNpilot_cont_500_bf_scaffold_279_20
unknown

Not on your lists

comp(18688..18861)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_279_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19093..20340)
DNA (1248bp) protein (416aa)
Aminotransferase class I and II n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBA8_NAKMY rbh
class I and II aminotransferase rbh
Aminotransferase class I and II {ECO:0000313|EMBL:ACV81400.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_279_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20352..22997)
DNA (2646bp) protein (882aa)
ATP-dependent chaperone ClpB n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC66_NAKMY rbh
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_279_23
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23203..23820
DNA (618bp) protein (206aa)
UPI0003CFC75B related cluster n=1 Tax=unknown RepID=UPI0003CFC75B
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KDA44656.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
SCNpilot_cont_500_bf_scaffold_279_24
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23945..25762
DNA (1818bp) protein (606aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Frankia sp. QA3 RepID=I8QNK3_9ACTO rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EIV93992.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
integral membrane multidrug-efflux transport protein rbh
SCNpilot_cont_500_bf_scaffold_279_25
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25921..26784
DNA (864bp) protein (288aa)
haloacid dehalogenase n=1 Tax=Humibacter albus RepID=UPI0003B318F0
HAD superfamily hydrolase
Predicted hydrolase (HAD superfamily) {ECO:0000313|EMBL:ABY23270.1}; TaxID=288705 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484; / NBRC 15589 / NCIMB 2235).;"
SCNpilot_cont_500_bf_scaffold_279_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26817..27863
DNA (1047bp) protein (349aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B702A3
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ERK70816.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative phosphate/phosphonate ABC transportersubstrate-binding protein; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_279_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28007..28813
DNA (807bp) protein (269aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphonates transport ATP-binding protein (EC:3.6.3.28); K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
phosphonate ABC transporter ATP-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B4E5B0
SCNpilot_cont_500_bf_scaffold_279_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28810..29664
DNA (855bp) protein (285aa)
phosphonate ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B4B5EB
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:ERK70814.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_279_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29661..30728
DNA (1068bp) protein (356aa)
phosphonate ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B53969
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:ERK70174.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphonates transport system permease; K02042 phosphonate transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_279_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30725..31627
DNA (903bp) protein (301aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SY48_LEIAQ
phosphoesterase
Displaying items 1-30 of 127 in total

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