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SCNpilot_cont_500_bf_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_304_trna_5
unknown

Not on your lists

comp(83..154)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_304_1
unknown

Not on your lists

157..324
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_trna_4
unknown

Not on your lists

comp(170..240)
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_304_trna_3
unknown

Not on your lists

comp(278..350)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_304_2
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(451..891)
DNA (441bp) protein (147aa)
Regulator n=2 Tax=Thermobifida fusca RepID=R9F5D6_THEFU
regulator
Putative regulator {ECO:0000313|EMBL:AAZ56144.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
SCNpilot_cont_500_bf_scaffold_304_trna_1
unknown

Not on your lists

1136..1207
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_304_3
unknown

Not on your lists

1397..1666
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1663..2016
DNA (354bp) protein (118aa)
Plasmid stablization protein n=4 Tax=Pseudomonas aeruginosa RepID=K1CIU9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KHK97867.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
plasmid stablization protein
SCNpilot_cont_500_bf_scaffold_304_5
unknown

Not on your lists

2256..2504
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_6
unknown

Not on your lists

2501..2845
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_7
unknown

Not on your lists

2920..3165
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_8
unknown

Not on your lists

comp(3440..3571)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_9
unknown

Not on your lists

comp(3568..3762)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_10
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3762..4124)
DNA (363bp) protein (121aa)
Phage terminase, small subunit, P27 family n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BK10_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KJK10785.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_304_11
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4271..5122)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR63271.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_500_bf_scaffold_304_12
unknown

Not on your lists

comp(5119..5274)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_13
unknown

Not on your lists

comp(5271..5459)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_14
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5456..5734)
DNA (279bp) protein (93aa)
WhiB family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4161C
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_500_bf_scaffold_304_15
unknown

Not on your lists

comp(5734..5898)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_16
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5895..6215)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GKP7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERF57384.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
SCNpilot_cont_500_bf_scaffold_304_17
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6372..7985)
DNA (1614bp) protein (538aa)
Phage/plasmid primase, P4 family n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZE05_SEGRD rbh
phage/plasmid primase; K06919 putative DNA primase/helicase rbh
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:ADG97285.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /; DSM 44985 / JCM 13578).;"
SCNpilot_cont_500_bf_scaffold_304_18
unknown

Not on your lists

comp(7982..8611)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_19
unknown

Not on your lists

comp(8608..8805)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_20
unknown

Not on your lists

comp(8876..9298)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9355..10422)
DNA (1068bp) protein (356aa)
Integrase family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XES3_NAKMY rbh
integrase rbh
Integrase family protein {ECO:0000313|EMBL:ACV79824.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_304_22
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10704..11084
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5U4D7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB40595.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_304_23
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11326..12333
DNA (1008bp) protein (336aa)
Patatin n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JS28_ARTS2 rbh
patatin; K07001 NTE family protein rbh
Patatin {ECO:0000313|EMBL:ABK01848.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_cont_500_bf_scaffold_304_24
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12512..13978
DNA (1467bp) protein (489aa)
Putative Na+/H+ antiporter CPA2 family n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0V6_9ACTN rbh
napA; Na+/H+ antiporter CPA2 family
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_cont_500_bf_scaffold_304_25
unknown

Not on your lists

13975..14478
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_304_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14529..14879)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW0_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79861.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 97 in total

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