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SCNpilot_cont_500_bf_scaffold_346

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_346_1
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118..1467
DNA (1350bp) protein (450aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
glutamate dehydrogenase n=1 Tax=Gordonia kroppenstedtii RepID=UPI00037C2953 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
SCNpilot_cont_500_bf_scaffold_346_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1577..2845
DNA (1269bp) protein (423aa)
PfkB domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQN2_NOCSJ rbh
ribokinase-like domain-containing protein rbh
PfkB domain protein {ECO:0000313|EMBL:ABL84117.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_500_bf_scaffold_346_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2842..3786
DNA (945bp) protein (315aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000255|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000255|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000255|HAMAP-Rule:MF_01876};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=PSUG_NOCSJ rbh
indigoidine synthase A family protein rbh
SCNpilot_cont_500_bf_scaffold_346_4
unknown

Not on your lists

comp(4466..4705)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_346_5
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4913..5536
DNA (624bp) protein (208aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TMD9_9MICO
SCNpilot_cont_500_bf_scaffold_346_6
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5694..6896)
DNA (1203bp) protein (401aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11] rbh
Cystathionine gamma-synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XT44_9ACTO rbh
Cystathionine gamma-synthase {ECO:0000313|EMBL:KGM10547.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_500_bf_scaffold_346_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7001..7501
DNA (501bp) protein (167aa)
AsnC family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XT05_9ACTO
AsnC family transcriptional regulator {ECO:0000313|EMBL:EYR63960.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_346_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7629..8453)
DNA (825bp) protein (275aa)
ABC-type sugar transport system, permease component n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=A8ZR51_DEIGD
sugar ABC transporter permease
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ABW34960.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
SCNpilot_cont_500_bf_scaffold_346_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8453..9409)
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIP0_MEISD
Uncharacterized protein {ECO:0000313|EMBL:ETK32861.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
extracellular solute-binding protein family 1; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_346_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9435..10814)
DNA (1380bp) protein (460aa)
sugar binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029A0FCA
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADP83577.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_346_11
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10959..12032)
DNA (1074bp) protein (358aa)
sugar kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5A472 rbh
Sugar kinase {ECO:0000313|EMBL:ELT45384.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
ribokinase-like domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_346_12
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12057..13409
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B1DF1 rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFK99702.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
6-phospho-beta-glucosidase rbh
SCNpilot_cont_500_bf_scaffold_346_13
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13626..13916
DNA (291bp) protein (97aa)
DNA polymerase, beta-like region-containing protein n=3 Tax=Azotobacter vinelandii RepID=C1DLC0_AZOVD
DNA polymerase, beta-like region-containing protein
DNA polymerase, beta-like region-containing protein {ECO:0000313|EMBL:ACO81113.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
SCNpilot_cont_500_bf_scaffold_346_14
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13913..14263
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037503C5
Uncharacterized protein {ECO:0000313|EMBL:KJK23789.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_346_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14387..14695)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035E57C1
ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:AEL24614.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
SCNpilot_cont_500_bf_scaffold_346_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14799..15149
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7B3A0
Uncharacterized protein {ECO:0000313|EMBL:AHH93452.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_346_17
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15146..15445
DNA (300bp) protein (100aa)
XRE family transcriptional regulator n=1 Tax=Saccharomonospora halophila RepID=UPI000379A5AC
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH10478.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_500_bf_scaffold_346_trna_3
unknown

Not on your lists

comp(15654..15726)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_346_trna_2
unknown

Not on your lists

comp(15768..15855)
DNA (88bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_346_18
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15962..16633)
DNA (672bp) protein (224aa)
Transcriptional regulator, HxlR family n=1 Tax=Mycobacterium marinum str. Europe RepID=S7SQJ2_MYCMR
Putative HTH-type transcriptional regulator yybR {ECO:0000313|EMBL:KJF20297.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
HxlR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_346_19
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

16780..17925
DNA (1146bp) protein (382aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XKW0_9PSEU
type 12 methyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_cont_500_bf_scaffold_346_20
unknown

Not on your lists

comp(17934..18431)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_346_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18965..20932)
DNA (1968bp) protein (656aa)
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK51_NAKMY rbh
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ACV76734.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_346_22
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20992..21729)
DNA (738bp) protein (246aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:KDA43020.1}; EC=3.1.1.45 {ECO:0000313|EMBL:KDA43020.1};; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
Carboxymethylenebutenolidase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J9R6_FRASC
SCNpilot_cont_500_bf_scaffold_346_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21858..22940
DNA (1083bp) protein (361aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Putative phenylalanine aminotransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK50_NAKMY rbh
SCNpilot_cont_500_bf_scaffold_346_24
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22937..23689
DNA (753bp) protein (251aa)
membrane protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036A192F
Uncharacterized protein {ECO:0000313|EMBL:GAJ80489.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein; K07090
SCNpilot_cont_500_bf_scaffold_346_25
unknown

Not on your lists

23976..24239
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_346_26
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24628..25743)
DNA (1116bp) protein (372aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Alanine dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYB3_CELFA
SCNpilot_cont_500_bf_scaffold_346_trna_1
unknown

Not on your lists

comp(25928..26012)
DNA (85bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_346_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26164..27165
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK40_NAKMY rbh
zinc metallopeptidase; K07054 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV76723.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 94 in total

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