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SCNpilot_cont_500_bf_scaffold_3049

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3049_1
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75..500)
DNA (426bp) protein (142aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
D-ribose pyranase; K06726 D-ribose pyranase [EC:5.-.-.-]
D-ribose pyranase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MVN6_9PSED
SCNpilot_cont_500_bf_scaffold_3049_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(565..1590)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00035FF2EF
laci family transcriptional regulator; K02529 LacI family transcriptional regulator
DNA-binding transcriptional repressor, hypoxanthine-binding {ECO:0000313|EMBL:CDX40399.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_3049_3
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1809..2852
DNA (1044bp) protein (348aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11); K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11]
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2ZHD6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD69477.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
SCNpilot_cont_500_bf_scaffold_3049_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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2845..4284
DNA (1440bp) protein (480aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2]
Dihydropyrimidinase id=4532701 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_500_bf_scaffold_3049_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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4387..5400
DNA (1014bp) protein (338aa)
2-deoxy-scyllo-inosamine dehydrogenase (EC:1.1.1.-); K00100 [EC:1.1.1.-] rbh
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003830B13 rbh
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_500_bf_scaffold_3049_6
unknown

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5509..6207
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3049_7
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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6207..6938
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AYA4_SYNWW
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
SCNpilot_cont_500_bf_scaffold_3049_8
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7135..7467)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XH71_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR59542.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
SCNpilot_cont_500_bf_scaffold_3049_9

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comp(7454..7741)
DNA (288bp) protein (96aa)
IS sequence n=1 Tax=mine drainage metagenome RepID=T0ZKI8_9ZZZZ
IS sequence {ECO:0000313|EMBL:EQD30350.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3049_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7969..9192)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS74_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22634.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_3049_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9523..10659)
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN33412.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
SCNpilot_cont_500_bf_scaffold_3049_12
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10656..11366)
DNA (711bp) protein (237aa)
Sigma-70 region 2 n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JKG4_RHOER
Sigma factor, RNA polymerase ECF-family {ECO:0000313|EMBL:CCH80142.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
RNA polymerase ECF-type sigma factor
SCNpilot_cont_500_bf_scaffold_3049_13
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11585..12361
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Corynebacterium lubricantis RepID=UPI0003821F7B rbh
Transposase {ECO:0000313|EMBL:CCH77532.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
transposase rbh
Displaying 13 items

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