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SCNpilot_cont_500_bf_scaffold_3607

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3607_1
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..184)
DNA (183bp) protein (61aa)
putative serine--pyruvate aminotransferase (EC:2.6.1.51); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Putative serine--pyruvate aminotransferase {ECO:0000313|EMBL:BAG30342.1}; EC=2.6.1.51 {ECO:0000313|EMBL:BAG30342.1};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
alanine--glyoxylate aminotransferase n=1 Tax=Kocuria rhizophila RepID=UPI00030B0348
SCNpilot_cont_500_bf_scaffold_3607_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

399..1721
DNA (1323bp) protein (441aa)
Bleomycin hydrolase (EC:3.4.22.40); K01372 bleomycin hydrolase [EC:3.4.22.40] rbh
Bleomycin hydrolase {ECO:0000313|EMBL:ADB30345.1}; EC=3.4.22.40 {ECO:0000313|EMBL:ADB30345.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Bleomycin hydrolase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q431_KRIFD rbh
SCNpilot_cont_500_bf_scaffold_3607_3
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1730..2149)
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003749CBF
PilT protein domain-containing protein
SCNpilot_cont_500_bf_scaffold_3607_4
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2133..2402)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003723CBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ14322.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
SCNpilot_cont_500_bf_scaffold_3607_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2399..3949)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B36362
DNA recombination protein RmuC {ECO:0000313|EMBL:EPR75211.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3607_6
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3991..4680
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029B459D
Putative iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:GAB77957.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling
SCNpilot_cont_500_bf_scaffold_3607_7
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4753..5115)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3H2_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10736.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_3607_8
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5223..5705)
DNA (483bp) protein (161aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BXG9_BEUC1
Polyketide cyclase {ECO:0000313|EMBL:KDF00473.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
Activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_500_bf_scaffold_3607_9
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5767..6165)
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GQC9_9ACTO
ribonuclease
SCNpilot_cont_500_bf_scaffold_3607_10
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6162..6392)
DNA (231bp) protein (77aa)
antitoxin n=1 Tax=Ruania albidiflava RepID=UPI0003B4D4B6
Uncharacterized protein {ECO:0000313|EMBL:KIC68348.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
SCNpilot_cont_500_bf_scaffold_3607_11
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6470..6772)
DNA (303bp) protein (101aa)
XRE family transcriptional regulator n=1 Tax=Brevibacterium sp. JC43 RepID=UPI00030E482C
XRE family transcriptional regulator {ECO:0000313|EMBL:KGN39462.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
Plasmid maintenance system antidote protein, XRE family
SCNpilot_cont_500_bf_scaffold_3607_12
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6840..7190)
DNA (351bp) protein (117aa)
PemK family protein; K07171 mRNA interferase [EC:3.1.-.-]
growth inhibitor PemK n=1 Tax=Mycobacterium avium RepID=UPI000367C627
Endoribonuclease EndoA {ECO:0000313|EMBL:GAB93019.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
SCNpilot_cont_500_bf_scaffold_3607_13
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7180..7407)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1Z5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPR75697.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3607_14
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7497..7916)
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GWK9_9ACTO
plasmid stability-like protein; K07062
SCNpilot_cont_500_bf_scaffold_3607_15
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7913..8149)
DNA (237bp) protein (79aa)
Prevent-host-death family protein n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GWL0_9ACTO
Prevent-host-death family protein {ECO:0000313|EMBL:GAB07985.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3607_16
unknown

Not on your lists

8405..8668
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3607_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8701..8901)
DNA (201bp) protein (67aa)
GTP-binding protein YchF n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE812
GTP-binding protein YchF; K06942
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_3607_18
Corynebacterium tuscaniense, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8870..9907)
DNA (1038bp) protein (346aa)
AAA+ superfamily ATPase n=1 Tax=Corynebacterium urealyticum DSM 7111 RepID=M4K780_9CORY rbh
AAA+ superfamily ATPase rbh
ATPase AAA {ECO:0000313|EMBL:KGF22283.1}; TaxID=1401064 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium tuscaniense DNF00037.;"
Displaying 18 items

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