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SCNpilot_cont_500_bf_scaffold_2830

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2830_1
unknown

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_2
unknown

Not on your lists

comp(311..520)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_3
unknown

Not on your lists

comp(549..737)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_4
unknown

Not on your lists

comp(765..983)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_5
unknown

Not on your lists

comp(1279..1542)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_6
Nephroselmis olivacea, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(1561..1866)
DNA (306bp) protein (102aa)
Ribosomal protein S14 n=1 Tax=Nephroselmis olivacea RepID=Q9TCB4_NEPOL
Ribosomal protein S14 {ECO:0000313|EMBL:AAF03183.1}; TaxID=31312 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Nephroselmidophyceae; Nephroselmis.;" source="Nephroselmis olivacea (Green alga).;"
succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like
SCNpilot_cont_500_bf_scaffold_2830_7
unknown

Not on your lists

comp(1918..2466)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_8
Sulfurihydrogenibium sp. YO3AOP1, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(2933..3220)
DNA (288bp) protein (96aa)
50S ribosomal protein L16 n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=RL16_SULSY
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=436114 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium sp. (strain YO3AOP1).;"
SCNpilot_cont_500_bf_scaffold_2830_9
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists


comp(3410..4162)
DNA (753bp) protein (251aa)
Ribosomal protein S3 n=1 Tax=Vermamoeba vermiformis RepID=D4PBJ2_VERVE
Ribosomal protein S3 {ECO:0000313|EMBL:ADD62204.1}; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
SCNpilot_cont_500_bf_scaffold_2830_10
unknown

Not on your lists

comp(4178..4339)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_11
Leptospira borgpetersenii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(4985..5185)
DNA (201bp) protein (67aa)
50S ribosomal protein L2 n=8 Tax=Leptospira borgpetersenii RepID=K6JZ81_LEPBO
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1303729 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee.;"
SCNpilot_cont_500_bf_scaffold_2830_12
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(5736..6944)
DNA (1209bp) protein (403aa)
Elongation factor Tu n=1 Tax=Vermamoeba vermiformis RepID=D4PBI9_VERVE rbh
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
elongation factor Tu; K02358 elongation factor Tu
SCNpilot_cont_500_bf_scaffold_2830_13
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists


comp(7196..7636)
DNA (441bp) protein (147aa)
30S ribosomal protein S2 id=4140435 bin=GWF2_Lentisphaerae_38_69 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
ribosomal protein S2
Tax=GWF2_Lentisphaerae_38_69_curated
SCNpilot_cont_500_bf_scaffold_2830_14
unknown

Not on your lists

comp(7877..8017)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_15

Not on your lists


comp(8059..8472)
DNA (414bp) protein (138aa)
30S ribosomal protein S7 {ECO:0000313|EMBL:KKQ56408.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=5096098 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_cont_500_bf_scaffold_2830_16
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists


comp(8481..8861)
DNA (381bp) protein (127aa)
Ribosomal protein S12 n=1 Tax=Vermamoeba vermiformis RepID=D4PBI7_VERVE
Ribosomal protein S12 {ECO:0000313|EMBL:ADD62199.1}; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
SCNpilot_cont_500_bf_scaffold_2830_17
unknown

Not on your lists

comp(9235..9555)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_18
Triatoma infestans, Triatoma, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists


comp(9583..10026)
DNA (444bp) protein (148aa)
Ribosomal protein L11 n=1 Tax=Andalucia godoyi RepID=M4Q9C9_9EUKA
Putative mitochondrial/ ribosomal protein l11 {ECO:0000313|EMBL:JAC17438.1}; TaxID=30076 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Triatoma.;" source="Triatoma infestans (Assassin bug).;"
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
SCNpilot_cont_500_bf_scaffold_2830_19
Helicosporidium sp. ex Simulium jonesi, Helicosporidium, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(10074..10370)
DNA (297bp) protein (99aa)
nad4L; NADH dehydrogenase subunit 4L; K03882 NADH-ubiquinone oxidoreductase chain 4L [EC:1.6.5.3]
NADH dehydrogenase subunit 4L n=1 Tax=Helicosporidium sp. subsp. Simulium jonesii RepID=D3IZV9_HELSJ
NADH dehydrogenase subunit 4L {ECO:0000313|EMBL:ACT36185.1}; TaxID=145475 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Helicosporidium.;" source="Helicosporidium sp. subsp. Simulium jonesii (Green alga).;"
SCNpilot_cont_500_bf_scaffold_2830_20
unknown

Not on your lists

10470..10634
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_21
Helicosporidium sp. ex Simulium jonesi, Helicosporidium, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(10616..10957)
DNA (342bp) protein (114aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=145475 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Helicosporidium.;" source="Helicosporidium sp. subsp. Simulium jonesii (Green alga).;"
nad1; NADH dehydrogenase subunit 1; K03878 NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Helicosporidium sp. subsp. Simulium jonesii RepID=D3IZV7_HELSJ
SCNpilot_cont_500_bf_scaffold_2830_22
Rhodomonas salina, Rhodomonas, Pyrenomonadales, Cryptophyta, Eukaryota

Not on your lists

comp(11102..11380)
DNA (279bp) protein (93aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=52970 species="Eukaryota; Cryptophyta; Pyrenomonadales; Pyrenomonadaceae; Rhodomonas.;" source="Rhodomonas salina (Cryptomonas salina).;"
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Rhodomonas salina RepID=Q9G8V3_RHDSA
nad1_2; NADH dehydrogenase subunit 1.2
SCNpilot_cont_500_bf_scaffold_2830_23
unknown

Not on your lists

comp(11679..12170)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_24
unknown

Not on your lists

comp(12192..12734)
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_25
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(12972..13751)
DNA (780bp) protein (260aa)
NADH dehydrogenase subunit 11 {ECO:0000313|EMBL:ADD62238.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ADD62238.1};; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
hypothetical protein ; K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]
NADH dehydrogenase subunit 11 n=1 Tax=Vermamoeba vermiformis RepID=D4PBM6_VERVE
SCNpilot_cont_500_bf_scaffold_2830_26
unknown

Not on your lists

comp(13798..13995)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_27
unknown

Not on your lists

comp(13989..14096)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2830_28
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(14476..14898)
DNA (423bp) protein (141aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
nad4, ndhD; nad4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Vermamoeba vermiformis RepID=D4PBM2_VERVE
SCNpilot_cont_500_bf_scaffold_2830_29
Roya obtusa, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(14837..15232)
DNA (396bp) protein (132aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=104537 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae; Zygnematales; Mesotaeniaceae; Roya.;" source="Roya obtusa.;"
nad4; NADH dehydrogenase subunit 4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Vermamoeba vermiformis RepID=D4PBM2_VERVE
SCNpilot_cont_500_bf_scaffold_2830_30
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(15269..15574)
DNA (306bp) protein (102aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
nad4; NADH dehydrogenase subunit 4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Vermamoeba vermiformis RepID=D4PBM2_VERVE
Displaying items 1-30 of 64 in total

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