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SCNpilot_cont_500_bf_scaffold_6178_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6178_curated_1
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..600)
DNA (600bp) protein (200aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC-type sugar transport system, ATPase component (Fragment) n=1 Tax=Herbaspirillum sp. YR522 RepID=J2W570_9BURK
D-ribose transporter ATP binding protein {ECO:0000313|EMBL:KHQ50132.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
SCNpilot_cont_500_bf_scaffold_6178_curated_2
unknown

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comp(752..1417)
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6178_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2107..2286)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XCM0_RHILT
Uncharacterized protein {ECO:0000313|EMBL:CDX35838.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Antibiotic biosynthesis monooxygenase
SCNpilot_cont_500_bf_scaffold_6178_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2288..3223)
DNA (936bp) protein (312aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K10440 ribose transport system permease protein
Monosaccharide-transporting ATPase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B6A085_RHILW
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR77897.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_6178_curated_5
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3224..4789)
DNA (1566bp) protein (522aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZG8_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EHS54161.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_6178_curated_6
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4786..5952)
DNA (1167bp) protein (389aa)
Oxidoreductase domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZG9_9RHIZ
Oxidoreductase domain protein {ECO:0000313|EMBL:EHS54162.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
oxidoreductase domain-containing protein
SCNpilot_cont_500_bf_scaffold_6178_curated_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6080..7201)
DNA (1122bp) protein (374aa)
Sugar ABC transporter periplasmic protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH0_9RHIZ
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:EHS54163.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6178_curated_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7245..8057)
DNA (813bp) protein (271aa)
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44]
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH1_9RHIZ
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EHS54164.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_6178_curated_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8242..9594
DNA (1353bp) protein (451aa)
ROK family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH2_9RHIZ
ROK family protein {ECO:0000313|EMBL:EHS54165.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
ROK family protein
SCNpilot_cont_500_bf_scaffold_6178_curated_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9606..10280
DNA (675bp) protein (225aa)
Sugar ABC transporter periplasmic protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH3_9RHIZ
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:EHS54166.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
Displaying 10 items

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