ggKbase home page

SCNpilot_cont_500_bf_scaffold_17247_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_17247_curated_1
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036BE0CA
Hydantoin utilization protein A {ECO:0000313|EMBL:GAK71976.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
SCNpilot_cont_500_bf_scaffold_17247_curated_2
unknown

Not on your lists

756..917
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_17247_curated_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(999..1520)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003772D2D
GAF domain protein {ECO:0000313|EMBL:KFC66938.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17247_curated_4
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1656..2954)
DNA (1299bp) protein (433aa)
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Peptidase, ArgE/DapE family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7G5_9PROT
Peptidase M20 family protein {ECO:0000313|EMBL:GAK71971.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
SCNpilot_cont_500_bf_scaffold_17247_curated_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3018..4697)
DNA (1680bp) protein (560aa)
hyuB; hydantoin utilization protein; K01474 N-methylhydantoinase B [EC:3.5.2.14]
Hydantoin utilization protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4F9_AGRVS
5-oxoprolinase {ECO:0000313|EMBL:KFL26349.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_500_bf_scaffold_17247_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4697..5881)
DNA (1185bp) protein (395aa)
N-methylhydantoinase A {ECO:0000313|EMBL:CDP50765.1}; EC=3.5.2.14 {ECO:0000313|EMBL:CDP50765.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hyuA; hydantoin utilization protein; K01473 N-methylhydantoinase A [EC:3.5.2.14]
Hydantoin utilization protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4F8_AGRVS
Displaying 6 items

View Taxonomy