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SCNpilot_cont_500_bf_scaffold_9106_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9106_curated_1
unknown

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comp(114..299)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9106_curated_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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592..1842
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D0665
Uncharacterized protein {ECO:0000313|EMBL:CDX35274.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9106_curated_3
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1846..2190)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366D364
hypothetical protein
Protein containing DUF1491 {ECO:0000313|EMBL:AEV36957.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_cont_500_bf_scaffold_9106_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2215..3051)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367023E
peptidoglycan binding domain-containing protein
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:ADZ71370.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_9106_curated_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3044..4480)
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
multi-sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037214B3
SCNpilot_cont_500_bf_scaffold_9106_curated_6
unknown

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5078..5257
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9106_curated_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5302..5733
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003602617
Sulfur acceptor protein SufE for iron-sulfur cluster assembly {ECO:0000313|EMBL:ESR22764.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
SCNpilot_cont_500_bf_scaffold_9106_curated_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5743..6516)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003753896
Uncharacterized protein {ECO:0000313|EMBL:KGD85840.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9106_curated_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6513..6881)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362CA7D
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:EJW10134.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
DNA replication initiation ATPase
SCNpilot_cont_500_bf_scaffold_9106_curated_10
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7077..7490)
DNA (414bp) protein (138aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI00035FB61A
Transcriptional regulator {ECO:0000313|EMBL:ERP94187.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
ROSMUCR transcriptional regulator
SCNpilot_cont_500_bf_scaffold_9106_curated_11
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7761..8792)
DNA (1032bp) protein (344aa)
monovalent cation/H+ antiporter subunit D (EC:1.6.5.3); K05568 multicomponent Na+:H+ antiporter subunit D
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ABC22432.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABC22432.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A9374
Displaying 11 items

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