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SCNpilot_cont_500_bf_scaffold_5408_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5408_curated_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1240
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367A1C0
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACB95033.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1348..2406
DNA (1059bp) protein (353aa)
permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003723736
Uncharacterized protein {ECO:0000313|EMBL:CCE11083.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5408_curated_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2413..3597)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003721DF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF87304.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3698..5452)
DNA (1755bp) protein (585aa)
Kef-type K+ transport system, predicted NAD-binding component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSA2_9RHIZ
Kef-type K+ transport system, predicted NAD-binding component {ECO:0000313|EMBL:EJN04008.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
potassium efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_cont_500_bf_scaffold_5408_curated_5
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5605..6432)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A8968
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACB94106.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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7166..7795
DNA (630bp) protein (210aa)
ATP-dependent exoDNAse subunit alpha; K01144 exodeoxyribonuclease V [EC:3.1.11.5]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036730F7
ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein {ECO:0000313|EMBL:ADZ69394.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_7
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7980..9470
DNA (1491bp) protein (497aa)
inosine 5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae
inosine-5`-monophosphate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037BA138
SCNpilot_cont_500_bf_scaffold_5408_curated_8
unknown

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9685..9882
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037AF0CC
SCNpilot_cont_500_bf_scaffold_5408_curated_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9898..10269
DNA (372bp) protein (124aa)
Terminal quinol oxidase subunit n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CVX7_9EURY
terminal quinol oxidase subunit
Terminal quinol oxidase subunit {ECO:0000313|EMBL:CCQ34827.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
SCNpilot_cont_500_bf_scaffold_5408_curated_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10294..11607
DNA (1314bp) protein (438aa)
RNA methyltransferase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D58EB
Putative RNA methyltransferase {ECO:0000313|EMBL:BAF89700.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11682..11957
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F4C5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65704.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_5408_curated_12
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12215..12892)
DNA (678bp) protein (226aa)
Cytosine deaminase {ECO:0000313|EMBL:ETW14695.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
Cytosine deaminase id=4208295 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytosine deaminase
SCNpilot_cont_500_bf_scaffold_5408_curated_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13113..13541
DNA (429bp) protein (143aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhizobium sp. Pop5 RepID=K0W512_9RHIZ
SCNpilot_cont_500_bf_scaffold_5408_curated_14
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13703..14359
DNA (657bp) protein (219aa)
Putative metal-dependent amidohydrolase (TAT secreted) n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EGV7_9BURK
Putative metal-dependent amidohydrolase (TAT secreted) {ECO:0000313|EMBL:EKZ98809.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
putative metal-dependent amidohydrolase (TAT secreted); K07047
Displaying 14 items

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