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SCNpilot_cont_500_bf_scaffold_15670_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15670_curated_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..418)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2K1_AGRVS
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46301.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein; K07046
SCNpilot_cont_500_bf_scaffold_15670_curated_2
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(456..1316)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003750A0E
Putative pyridoxal 4-dehydrogenase {ECO:0000313|EMBL:GAK72968.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
fdh; D-threo-aldose 1-dehydrogenase
SCNpilot_cont_500_bf_scaffold_15670_curated_3
unknown

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1783..1989
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_15670_curated_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2094..3479
DNA (1386bp) protein (462aa)
Transcriptional regulator GntR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2K9_AGRVS
GntR family transcriptional regulator
Transcriptional regulator GntR family {ECO:0000313|EMBL:ACM39107.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_15670_curated_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3448..4026)
DNA (579bp) protein (193aa)
Needs to be deleted n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MAP7_RHISN
needs to be deleted
Needs to be deleted {ECO:0000313|EMBL:ACP27040.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_500_bf_scaffold_15670_curated_6
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4297..5106
DNA (810bp) protein (270aa)
Dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2L1_AGRVS
Putative oxidoreductase {ECO:0000313|EMBL:GAK72976.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
dehydrogenase
SCNpilot_cont_500_bf_scaffold_15670_curated_7
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5143..5940
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2L2_AGRVS
Putative oxidoreductase {ECO:0000313|EMBL:GAK72977.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
short-chain dehydrogenase/reductase
SCNpilot_cont_500_bf_scaffold_15670_curated_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6565..6738
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16595.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
Displaying 8 items

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