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SCNpilot_cont_500_bf_scaffold_42177_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_42177_curated_1
unknown

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2..103
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42177_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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100..894
DNA (795bp) protein (265aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D1AB7
Lyso-ornithine lipid acyltransferase {ECO:0000313|EMBL:ABD89653.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_42177_curated_3
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2046..2351
DNA (306bp) protein (102aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E0644
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_cont_500_bf_scaffold_42177_curated_4
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2348..3430
DNA (1083bp) protein (361aa)
phosphate starvation protein PhoH n=1 Tax=Kaistia granuli RepID=UPI00036974E5
Phosphate starvation inducible protein {ECO:0000313|EMBL:EFO32748.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
hypothetical protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
SCNpilot_cont_500_bf_scaffold_42177_curated_5
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3427..3921
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003621BB1
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_cont_500_bf_scaffold_42177_curated_6
unknown

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comp(4012..4320)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42177_curated_7
unknown

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comp(4335..4481)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42177_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4783..4944
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF149
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_42177_curated_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5211..6512
DNA (1302bp) protein (434aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CC0F2
SCNpilot_cont_500_bf_scaffold_42177_curated_10
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6667..7077
DNA (411bp) protein (137aa)
Cro/Cl family transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI0003749012
Transcriptional regulator protein {ECO:0000313|EMBL:EFO32752.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
transcriptional regulator, XRE family
SCNpilot_cont_500_bf_scaffold_42177_curated_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7251..8453
DNA (1203bp) protein (401aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S-adenosylmethionine synthetase n=1 Tax=Kaistia granuli RepID=UPI00036015B0
SCNpilot_cont_500_bf_scaffold_42177_curated_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8450..9148
DNA (699bp) protein (233aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371A0D2
SCNpilot_cont_500_bf_scaffold_42177_curated_13
unknown

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comp(9165..9419)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42177_curated_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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9576..9920
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363DEB6
ribosome maturation factor rimP; K09748 ribosome maturation factor RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 14 items

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