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SCNpilot_cont_500_bf_scaffold_13020_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13020_curated_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..265
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB11794.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Two-component response regulator id=3743703 bin=GWC2_Chloroflexi_49_37 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_13020_curated_2
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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comp(291..1091)
DNA (801bp) protein (267aa)
Putative monooxygenase, DszA family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WE70_KINRD
DszA family monooxygenase
Putative monooxygenase, DszA family {ECO:0000313|EMBL:ABS05109.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_500_bf_scaffold_13020_curated_3
unknown

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2039..2845
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_13020_curated_4
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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2850..3755
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WE68_KINRD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABS05107.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_500_bf_scaffold_13020_curated_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4022..5038
DNA (1017bp) protein (339aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
Putrescine transport ATP-binding protein PotA n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K8Y4_9RHOB
spermidine/putrescine ABC transporter ATPase; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_13020_curated_6
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5057..5932
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037C0002
polyamine ABC transporter permease; K11071 spermidine/putrescine transport system permease protein
Polyamine ABC transporter, permease protein {ECO:0000313|EMBL:AAY94395.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
SCNpilot_cont_500_bf_scaffold_13020_curated_7
unknown

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5973..6056
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 7 items

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