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SCNpilot_cont_500_bf_scaffold_4690_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4690_curated_1
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..239
DNA (237bp) protein (79aa)
Peptide/nickel/opine uptake ABC transporter ATP-binding protein putative n=1 Tax=Citreicella sp. 357 RepID=I1AYT5_9RHOB
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI30320.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
appF; oligopeptide transport ATP-binding protein AppF; K13892 glutathione transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_4690_curated_2
unknown

Not on your lists

comp(223..420)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587..1438
DNA (852bp) protein (284aa)
metal-dependent amidase/aminoacylase/carboxypeptidase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4U1_9PROT
Amidohydrolase {ECO:0000313|EMBL:EHL97965.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_4690_curated_4
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1488..2246)
DNA (759bp) protein (253aa)
Apolipoprotein N-acyltransferase in lipid-linked oligosaccharide synthesis cluster n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MBH4_9NOCA
Esterase {ECO:0000313|EMBL:KDE11168.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
esterase
SCNpilot_cont_500_bf_scaffold_4690_curated_5
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2243..3289)
DNA (1047bp) protein (349aa)
Isopenicillin-N synthase n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WQL0_9NOCA
Isopenicillin-N synthase {ECO:0000313|EMBL:EOM77565.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
isopenicillin-N synthase
SCNpilot_cont_500_bf_scaffold_4690_curated_6
unknown

Not on your lists

comp(4819..5007)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5580..7046
DNA (1467bp) protein (489aa)
Uncharacterized conserved protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IFS9_AZOC5
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAF89645.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_4690_curated_8
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6995..7843)
DNA (849bp) protein (283aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YNA0_MOBAS
Exodeoxyribonuclease III {ECO:0000313|EMBL:EAS51131.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_500_bf_scaffold_4690_curated_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7904..8431)
DNA (528bp) protein (176aa)
Mannose-6-phosphate isomerase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9R3_9BRAD
Cupin {ECO:0000313|EMBL:KJC44964.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
cupin
SCNpilot_cont_500_bf_scaffold_4690_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8451..9377)
DNA (927bp) protein (309aa)
alcohol dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036B3380
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36236.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_4690_curated_11
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9462..10343
DNA (882bp) protein (294aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I1F7_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EJN12341.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4690_curated_12
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10352..10834)
DNA (483bp) protein (161aa)
CopG family transcripitonal regulator n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034AD7FA
CopG family transcriptional regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ACB79464.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_500_bf_scaffold_4690_curated_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10978..11376)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QHA9_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE29167.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_500_bf_scaffold_4690_curated_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12342..13517)
DNA (1176bp) protein (392aa)
Alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PGN9_9RHIZ
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:EKF60073.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_500_bf_scaffold_4690_curated_15
unknown

Not on your lists

13665..13853
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_16
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13905..14510
DNA (606bp) protein (202aa)
UPI0003CE4837 related cluster n=1 Tax=unknown RepID=UPI0003CE4837
RNA polymerase sigma factor, sigma-70 family
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:ESY86884.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_500_bf_scaffold_4690_curated_17
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14570..14806)
DNA (237bp) protein (79aa)
UPI0003D03F65 related cluster n=1 Tax=unknown RepID=UPI0003D03F65
Membrane protein {ECO:0000313|EMBL:ESZ78407.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein; K08995 putative membrane protein
SCNpilot_cont_500_bf_scaffold_4690_curated_18
unknown

Not on your lists

15256..15468
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_19
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15495..15812)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWR2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00736.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_4690_curated_20
unknown

Not on your lists

16487..16609
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_21
unknown

Not on your lists

16632..16772
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16803..17369)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1U1_9BURK
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV60989.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4690_curated_23
unknown

Not on your lists

comp(17366..17599)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_24
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17691..18200
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXM6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35264.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4690_curated_25
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18336..20267)
DNA (1932bp) protein (644aa)
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family (EC:1.1.5.2)
Membrane-bound PQQ-dependent dehydrogenase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QFJ7_9RHIZ
Membrane-bound PQQ-dependent dehydrogenase {ECO:0000313|EMBL:EJT06983.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
SCNpilot_cont_500_bf_scaffold_4690_curated_26
unknown

Not on your lists

comp(20586..20723)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4690_curated_27
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20841..22604
DNA (1764bp) protein (588aa)
thiamine pyrophosphate protein domain-containing protein; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
pyruvate oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C453B
Pyruvate oxidase {ECO:0000313|EMBL:ESZ09966.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
SCNpilot_cont_500_bf_scaffold_4690_curated_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22670..23494)
DNA (825bp) protein (275aa)
catalase (EC:1.11.1.6); K07217 Mn-containing catalase
Catalase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV8_9RHIZ
Catalase {ECO:0000313|EMBL:EKF60701.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_cont_500_bf_scaffold_4690_curated_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23763..26765
DNA (3003bp) protein (1001aa)
Sensory box protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTV7_9SPHN
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13393.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
sensor histidine kinase
SCNpilot_cont_500_bf_scaffold_4690_curated_30
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26758..27129
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DDI2_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EJT00966.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
response regulator receiver protein
Displaying items 1-30 of 35 in total

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