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SCNpilot_cont_500_bf_scaffold_5964_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5964_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..210)
DNA (210bp) protein (70aa)
phosphonate C-P lyase n=1 Tax=Kaistia granuli RepID=UPI000375A100
phnK; phosphonate C-P lyase system protein PhnK; K05781 putative phosphonate transport system ATP-binding protein
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EMS95287.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
SCNpilot_cont_500_bf_scaffold_5964_curated_2
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(207..689)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371607B
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIZ85974.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_5964_curated_3
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(686..1756)
DNA (1071bp) protein (357aa)
carbon-phosphorus lyase complex subunit PhnJ n=1 Tax=Kaistia granuli RepID=UPI0003807E5D
Phosphonate C-P lyase system protein PhnJ {ECO:0000313|EMBL:EDQ31406.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
phosphonate metabolism PhnJ; K06163 PhnJ protein
SCNpilot_cont_500_bf_scaffold_5964_curated_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1753..2847)
DNA (1095bp) protein (365aa)
carbon-phosphorus lyase complex subunit PhnI n=1 Tax=Kaistia granuli RepID=UPI000369C260
phosphonate metabolism protein; K06164 PhnI protein
Phosphonate metabolism {ECO:0000313|EMBL:ACL59085.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_5964_curated_5
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2847..3446)
DNA (600bp) protein (200aa)
carbon-phosphorus lyase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034B5CF3
Phosphonate C-P lyase system protein PhnH {ECO:0000313|EMBL:EIZ85977.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
phosphonate C-P lyase system protein PhnH; K06165 PhnH protein
SCNpilot_cont_500_bf_scaffold_5964_curated_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3449..3985)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036016BF
PhnG protein {ECO:0000313|EMBL:BAQ44655.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
phosphonate C-P lyase system protein PhnG; K06166 PhnG protein
SCNpilot_cont_500_bf_scaffold_5964_curated_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4037..4855
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367087E
GntR family transcriptional regulator; K02043 GntR family transcriptional regulator, phosphonate transport system regulatory protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACA17331.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_5964_curated_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4859..6193)
DNA (1335bp) protein (445aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6US08_9RHIZ
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ENN84495.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_5964_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6205..7158)
DNA (954bp) protein (318aa)
phosphonate ABC transporter permease n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI0003754D10
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EJB04725.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
phosphonate ABC transporter, permease protein
SCNpilot_cont_500_bf_scaffold_5964_curated_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7229..7957)
DNA (729bp) protein (243aa)
Phosphonate ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNY6_AGRRK
phosphonate ABC transporter; K02044 phosphonate transport system substrate-binding protein
Phosphonate ABC transporter {ECO:0000313|EMBL:ACM29266.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_5964_curated_11
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8217..9035)
DNA (819bp) protein (273aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
phnC; phosphonate ABC transporter ATP-binding protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380EB81
SCNpilot_cont_500_bf_scaffold_5964_curated_12
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9221..9832
DNA (612bp) protein (204aa)
hexapeptide repeat-containing phosphonate metabolisn transferase; K00680 [EC:2.3.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036B88E0
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:AIQ92164.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCNpilot_cont_500_bf_scaffold_5964_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..11117
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000366BD05
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABZ72819.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_5964_curated_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11083..12345)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000364AAFD
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46846.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
rfe; UDP-phosphate alpha N-acetylglucosaminyltransferase; K13662 putative polymerase
SCNpilot_cont_500_bf_scaffold_5964_curated_15
unknown

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comp(12348..12464)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5964_curated_16
unknown

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12769..13182
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5964_curated_17
unknown

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13453..13806
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5964_curated_18
unknown

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13816..14157
DNA (342bp) protein (114aa)

This feature has no annotations

Displaying 18 items

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