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SCNpilot_cont_500_bf_scaffold_15155_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15155_curated_1
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..117)
DNA (117bp) protein (39aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5]
3''''-5'''' exonuclease n=1 Tax=Kaistia granuli RepID=UPI000363BB61
Ribonuclease D/3'-5' exonuclease {ECO:0000313|EMBL:GAN58781.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
SCNpilot_cont_500_bf_scaffold_15155_curated_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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326..1438
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036878EF
Putative dehydrogenase {ECO:0000313|EMBL:EIM26160.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
deoxyfructose oxidoreductase
SCNpilot_cont_500_bf_scaffold_15155_curated_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1578..2006
DNA (429bp) protein (143aa)
heat-shock protein n=1 Tax=Kaistia granuli RepID=UPI0003695EF3
Small heat shock protein {ECO:0000313|EMBL:EAV44311.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
small heat shock protein; HSP20-like chaperone
SCNpilot_cont_500_bf_scaffold_15155_curated_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2041..2292
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379FEE6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL59604.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_15155_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2305..2853)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKQ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM24549.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_15155_curated_6
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2955..5372)
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369E410
SCNpilot_cont_500_bf_scaffold_15155_curated_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5383..5721)
DNA (339bp) protein (113aa)
Phenylalanyl-tRNA synthetase, alpha subunit; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Kaistia granuli RepID=UPI000374F092
SCNpilot_cont_500_bf_scaffold_15155_curated_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5995..6567
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A904_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE58936.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_cont_500_bf_scaffold_15155_curated_9
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6626..7000)
DNA (375bp) protein (125aa)
50S ribosomal protein L20 n=1 Tax=Kaistia granuli RepID=UPI00036DF503
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_cont_500_bf_scaffold_15155_curated_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7024..7218)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Kaistia granuli RepID=UPI000371E527
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_15155_curated_11
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7490..7750)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369ECDE
Translation initiation factor IF-3 {ECO:0000313|EMBL:KHJ53415.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3
Displaying 11 items

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