ggKbase home page

SCNpilot_cont_500_bf_scaffold_2202_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2202_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..356
DNA (354bp) protein (118aa)
Nitrate reductase 1, gamma (Cytochrome b(NR)) subunit {ECO:0000313|EMBL:CDX53666.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX53666.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
narI; nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Nitrate reductase, gamma subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU1_HYPSM
SCNpilot_cont_500_bf_scaffold_2202_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

359..1267
DNA (909bp) protein (303aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWU9_AZOC5
SCNpilot_cont_500_bf_scaffold_2202_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1275..1562
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUF5_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:CDX53670.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2202_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1559..2815
DNA (1257bp) protein (419aa)
Molybdopterin biosynthesis protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUM7_TISMK
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:CDX53672.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
moeA; molybdopterin biosynthesis protein
SCNpilot_cont_500_bf_scaffold_2202_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..4809
DNA (459bp) protein (153aa)
Putative integral membrane protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU4_HYPSM
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:CCB66467.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_2202_curated_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4822..6012
DNA (1191bp) protein (397aa)
NnrS protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCU5_HYPSM
nnrS; NnrS protein; K07234 uncharacterized protein involved in response to NO
NnrS protein {ECO:0000313|EMBL:CCB66468.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_2202_curated_7
unknown

Not on your lists

6304..6528
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_curated_8
unknown

Not on your lists

6566..6700
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_curated_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6907..7371)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2P1_SPHJU
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_curated_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7371..8555)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2P3_9BRAD
UBA/THIF-type NAD/FAD binding fold protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_curated_11
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8530..9273)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHH0_RHIRD
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_curated_12
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9354..10922)
DNA (1569bp) protein (523aa)
putative ATP-dependent DNA helicase (EC:3.6.1.-)
Putative ATP-dependent DNA helicase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N8_SPHJU
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_500_bf_scaffold_2202_curated_13
unknown

Not on your lists

11466..12119
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_curated_14
unknown

Not on your lists

12138..13319
DNA (1182bp) protein (394aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2202_curated_15
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13343..14122)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ33_RHOPX
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Displaying 15 items

View Taxonomy