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SCNpilot_cont_500_bf_scaffold_5306_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5306_curated_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..606
DNA (606bp) protein (202aa)
UPI0003CE2DBC related cluster n=1 Tax=unknown RepID=UPI0003CE2DBC
Uncharacterized protein {ECO:0000313|EMBL:KFL31387.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5306_curated_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

674..1576
DNA (903bp) protein (301aa)
UPI0003CE3AE2 related cluster n=1 Tax=unknown RepID=UPI0003CE3AE2
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL31388.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transporter; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5306_curated_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1865..2368
DNA (504bp) protein (168aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H0P9_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KFL31389.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5306_curated_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2397..3074)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V947_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87522.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phenol hydroxylase
SCNpilot_cont_500_bf_scaffold_5306_curated_5
unknown

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comp(3041..3283)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5306_curated_6
unknown

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comp(3573..3806)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5306_curated_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3999..4901
DNA (903bp) protein (301aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Burkholderia bryophila RepID=UPI000375E6A0
Uncharacterized protein {ECO:0000313|EMBL:KFL31391.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_5306_curated_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4921..5475
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31392.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_500_bf_scaffold_5306_curated_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5555..6832)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036FD285
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:CDP51164.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_5306_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7010..7552)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILS8_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68971.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_5306_curated_11
unknown

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comp(7549..8007)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035E1C1B
SCNpilot_cont_500_bf_scaffold_5306_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9282..9482)
DNA (201bp) protein (67aa)
uracil-DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Uracil-DNA glycosylase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFK4_9RHIZ
Uracil-DNA glycosylase {ECO:0000313|EMBL:AHB48749.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_cont_500_bf_scaffold_5306_curated_13
unknown

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9766..10017
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5306_curated_14
unknown

Not on your lists

10260..10772
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5306_curated_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10691..11662)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVF8_AZOBR
Radical SAM protein {ECO:0000313|EMBL:KJR61983.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein, putative elongator protein 3/MiaB/NifB
SCNpilot_cont_500_bf_scaffold_5306_curated_16
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12058..13665
DNA (1608bp) protein (536aa)
Beta-lactamase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEA5_METNO
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACL59477.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_5306_curated_17
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13742..14506
DNA (765bp) protein (255aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PQZ3_RHOS1
Uncharacterized protein {ECO:0000313|EMBL:KEO60330.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
CDP-alcohol phosphatidyltransferase
SCNpilot_cont_500_bf_scaffold_5306_curated_18
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14503..16122
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00037831C2
Uncharacterized protein {ECO:0000313|EMBL:KEO60331.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
sulfatase
SCNpilot_cont_500_bf_scaffold_5306_curated_19
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16322..16918
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D397_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KKB11760.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying 19 items

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