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SCNpilot_cont_500_bf_scaffold_19880_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_19880_curated_1
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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58..1494
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361B18E
virulence protein
Virulence protein {ECO:0000313|EMBL:ABC23678.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_2
unknown

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comp(1379..2242)
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19880_curated_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2540..3877)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366CD4F
hypothetical protein
Membrane-like protein {ECO:0000313|EMBL:ABQ70859.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4384..4938)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380470A
LemA family protein; K03744 LemA protein
LemA family protein {ECO:0000313|EMBL:ABQ70858.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5083..5553)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2A4_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89567.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5592..6797)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037580FC
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ADH90247.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6885..7358)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ECB901
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF00552.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_19880_curated_8

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comp(7355..7540)
DNA (186bp) protein (62aa)
ArsR family transcriptional regulator n=2 Tax=mine drainage metagenome RepID=T1CDM4_9ZZZZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:EQD51643.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transcriptional regulatory protein, Ars family
SCNpilot_cont_500_bf_scaffold_19880_curated_9
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8094..9065)
DNA (972bp) protein (324aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KIV68566.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KIV68566.1};; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SB63_MICSL
SCNpilot_cont_500_bf_scaffold_19880_curated_10
unknown

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10200..10358
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19880_curated_11
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10327..10458)
DNA (132bp) protein (44aa)
peptide chain release factor 3 n=1 Tax=Kaistia granuli RepID=UPI00037D881C
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_500_bf_scaffold_19880_curated_12
unknown

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10834..11007
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 12 items

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