ggKbase home page

SCNpilot_cont_500_bf_scaffold_4190_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 14802..16556

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0M6_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 408.0
  • Bit_score: 332
  • Evalue 6.30e-88
porin similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 408.0
  • Bit_score: 332
  • Evalue 2.00e-88
Porin {ECO:0000313|EMBL:ADH91347.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 408.0
  • Bit_score: 332
  • Evalue 8.90e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
GTGAGGTGGCGTGTTGCGAGCAGCGGCCTTGCGATTGCCGTCCTCTCGATCGGGCTGCTCGCGGCCGGAACTGAAGGCGCCTTCGCGACCGGAAACCGGACGACGCACAAGAAGCAGGCGACGACCGGAAGAGCCGACCCGATCGGCGATGCGCGCTGCATCGAGCAGGGCAAATCCTATATCTGGGTCGAAGCTCTCGGCACCTGCTTCAATCCCGGCGGCTATCTCTGGGTCGAAGGTTACGCCAACGGCTACACGGACTATCCGTCGGGCGCCGACAAAATCTATGGCATCGGGACACTCGGGCTGACGCTGAAGACGACGACCGGCCTCGGCTTCGGGGGGCCGCTCAAGACTGCGGCCGACATTCGCTTCCAGCTTCGGACCGCGGATCCCTATGGCGGCGGACCACCGGAGTTCCAGGTCGAGCCGCAGACGCTCACGGCTAGCTGGGGCGGTGTGACGGTCGGCTATGGCACCTCCATGTTCGACTTCTACGCCAACGCCAATATCGAGGGCACGGATCCGACCACGATCGGCGACAGCACGAGCCTGCCCTGCGTCGCCTTCACGGCGCCCATCCCCGGCGGCTTCTCGGCGACACTGTCGCTCGAGCAGGGCAAGTATCATATCTGGGTCGAAGCTCTCGGCACCTGCTTCAATCCCGGCGGCTATCTCTGGGTCGAAGGTTACGCCAACGGCTACACGGACTATCCGTCGGGCGCCGACAAAATCTATGGCATCGGGACACTCGGGCTGACGCTGAAGACGACGACCGGCCTCGGCTTCGGGGGGCCGCTCAAGACTGCGGCCGACATTCGCTTCCAGCTTCGGACCGCGGATCCCTATGGCGGCGGACCACCGGAGTTCCAGGTCGAGCCGCAGACGCTCACGGCTAGCTGGGGCGGTGTGACGGTCGGCTATGGCACCTCCATGTTCGACTTCTACGCCAACGCCAATATCGAGGGCACGGATCCGACCACGATCGGCGACAGCACGAGCCTGCCCTTCGTCGCCTTCACGGCGCCCATCCCCGGCGGCTTCTCGGCGACACTGTCGCTCGAGCAGGGCAATTATCGCAGCGGCGGCATCGCGCCGGCCGATGCCGATACCTCAGCCGTCTTCGGCCAGAACGCGGCGATGCCCGATCTCGTCGCCGCCCTCGGCCAGACGACCAGCTGGGGCCGCTATCAGGTCTCCGGCGCGCTGCACAAGGTGGTGATCAACGGATCGCCCGATTTCGCCGGCTCCAATCCCTCGACCTGGGGCTTCGCTGTGCAGGGTGGCGTCATGATCGCTCTGCCGATGATCGCGGACAAGGATTCGCTCTATCTGCAGACGGCTTATGTAGACGGCGCGACCACCTATCTCGGGCTCGTCGATCCGAGCGGCGACTTCGCGCCGCCGGACGCCTATTACTCCCCGACCGGCGGCTTCTCGCGCGTGACCGGCTGGAACGTCACCGCGCAATATCTGCACAACTGGACGCCGACGCTGAACTCGGCCTTCTTCGGCGGCTATGCCGATTTCAAGCTCAACGATGTGCTGGCCGAAGCGACCTATGGCGCGTCGGGCGCCGGCAACTTCAATTTCGGCGCCAATCTCGTCTGGTCACCGAACAGCAACACGAAGCTCCTCGCCCAATACATCTATAATTACTATGGCGCGCAGGACTATGTCGACACGACGAACGGGCTGCCCGCCGCATCGCAGGACGCGCACGACCTCTTGCTGATGGCGCAATACGCATTCTGA
PROTEIN sequence
Length: 585
VRWRVASSGLAIAVLSIGLLAAGTEGAFATGNRTTHKKQATTGRADPIGDARCIEQGKSYIWVEALGTCFNPGGYLWVEGYANGYTDYPSGADKIYGIGTLGLTLKTTTGLGFGGPLKTAADIRFQLRTADPYGGGPPEFQVEPQTLTASWGGVTVGYGTSMFDFYANANIEGTDPTTIGDSTSLPCVAFTAPIPGGFSATLSLEQGKYHIWVEALGTCFNPGGYLWVEGYANGYTDYPSGADKIYGIGTLGLTLKTTTGLGFGGPLKTAADIRFQLRTADPYGGGPPEFQVEPQTLTASWGGVTVGYGTSMFDFYANANIEGTDPTTIGDSTSLPFVAFTAPIPGGFSATLSLEQGNYRSGGIAPADADTSAVFGQNAAMPDLVAALGQTTSWGRYQVSGALHKVVINGSPDFAGSNPSTWGFAVQGGVMIALPMIADKDSLYLQTAYVDGATTYLGLVDPSGDFAPPDAYYSPTGGFSRVTGWNVTAQYLHNWTPTLNSAFFGGYADFKLNDVLAEATYGASGAGNFNFGANLVWSPNSNTKLLAQYIYNYYGAQDYVDTTNGLPAASQDAHDLLLMAQYAF*