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SCNpilot_cont_500_bf_scaffold_16149_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 4721..5308

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Kaistia granuli RepID=UPI00036360B8 similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 198.0
  • Bit_score: 355
  • Evalue 4.00e-95
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 197.0
  • Bit_score: 301
  • Evalue 2.10e-79
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 197.0
  • Bit_score: 301
  • Evalue 9.60e-79

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGGCGACGAAGGTACAGGAAAACGAAGAGGCCCAGGAGGCGACGTCCGAGCCCCAGGACGGTCCGCTTCTGGACCTCTCCGATGCCGCCGTCAAGCGGATGATCAAGGTCGCCAAGAAGCGCGGATTCGTCACCTATGACGAGCTCAATTCCGTGCTGCCGTCCGAGCAGGTCGGCTCCGAGCAGATCGAGGACATCCTCTCGATGCTGTCGGAAATGGGCATCAATGTGATCGAGGCCGACGAGGTCGAGGAGGCCGACGAGTCAGGCGACGCCGAGGAGGAAGCGGGCGAGCTCGCCGAGTCCACCGGCACCGCCGTCGCCAAGACCACGACCACGCGCGAGCCGACCGACCGCACCGACGACCCGGTGCGCATGTATCTGCGCGAGATGGGCTCGGTGGAGCTGCTCTCCCGCGAGGGCGAGATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGACGATGATCGCGGGTCTCTGCGAGAGCCCCCTCACCTTCCAGGCGATCATCATCTGGAAGGAGGAGCTTGCCGAGGGCAAGATTCTCCTGCGCGACATCATCGACCTCGAGGCCACCTATGCCGGC
PROTEIN sequence
Length: 196
MATKVQENEEAQEATSEPQDGPLLDLSDAAVKRMIKVAKKRGFVTYDELNSVLPSEQVGSEQIEDILSMLSEMGINVIEADEVEEADESGDAEEEAGELAESTGTAVAKTTTTREPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWKEELAEGKILLRDIIDLEATYAG