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SCNpilot_cont_500_bf_scaffold_16149_curated

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16149_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..826)
DNA (825bp) protein (275aa)
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
carbamoyl phosphate synthase small subunit n=1 Tax=Kaistia granuli RepID=UPI0003702333
SCNpilot_cont_500_bf_scaffold_16149_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1075..1527
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003722C44
hypothetical protein; K09117 hypothetical protein
GatB family aspartyl/glutamyl-tRNA amidotransferase protein {ECO:0000313|EMBL:AGS22752.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_500_bf_scaffold_16149_curated_3
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1547..2539
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036EDE76
Methyltransferase {ECO:0000313|EMBL:ERI13959.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
ribosomal small subunit Rsm22
SCNpilot_cont_500_bf_scaffold_16149_curated_4

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2609..4552
DNA (1944bp) protein (648aa)
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F4A53
Uncharacterized protein {ECO:0000313|EMBL:KKN82889.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_16149_curated_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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4721..5308
DNA (588bp) protein (196aa)
RNA polymerase sigma factor RpoD n=1 Tax=Kaistia granuli RepID=UPI00036360B8
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 5 items

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