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SCNpilot_cont_500_bf_scaffold_2506_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2506_curated_1
unknown

Not on your lists

3..89
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2506_curated_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259..2217)
DNA (1959bp) protein (653aa)
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial {ECO:0000313|EMBL:CDX18917.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CDX18917.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
carbamoyl-phosphate synthase L chain ATP-binding protein (EC:6.4.1.4); K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
UPI0003CDFDCD related cluster n=1 Tax=unknown RepID=UPI0003CDFDCD
SCNpilot_cont_500_bf_scaffold_2506_curated_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..2855)
DNA (612bp) protein (204aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3R4_MESOW
Lysine exporter LysE/YggA {ECO:0000313|EMBL:CDX44766.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_2506_curated_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3803..4396)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y374_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13868.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Appr-1-p processing
SCNpilot_cont_500_bf_scaffold_2506_curated_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4420..5055)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMV1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05468.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
glutathione S-transferase
SCNpilot_cont_500_bf_scaffold_2506_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5157..5840
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0E2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53554.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2506_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5862..6782)
DNA (921bp) protein (307aa)
signal protein PDZ n=1 Tax=Rhizobium leguminosarum RepID=UPI0003749879
serine protease
Putative serine protease {ECO:0000313|EMBL:CAK06914.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_2506_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6891..7799)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium gallicum RepID=UPI00037AED2B
LysR family transcriptional regulator
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CAK10673.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_2506_curated_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7895..8791
DNA (897bp) protein (299aa)
Aldo/keto reductase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGF6_MESCW
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADV13547.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2506_curated_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8804..9208)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JB88_9RHIZ
YCII-related protein {ECO:0000313|EMBL:EUB97101.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2506_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9349..10155)
DNA (807bp) protein (269aa)
Putative hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSE9_RHITR
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AGB74152.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2506_curated_12
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10436..11332)
DNA (897bp) protein (299aa)
UPI0003CF9993 related cluster n=1 Tax=unknown RepID=UPI0003CF9993
Restriction endonuclease {ECO:0000313|EMBL:ESY77667.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein; K07454 putative restriction endonuclease
SCNpilot_cont_500_bf_scaffold_2506_curated_13
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11442..12983
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDP1_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ47128.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2506_curated_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12995..14779)
DNA (1785bp) protein (595aa)
acetyl/propionyl CoA carboxylase subunit beta; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
methylcrotonoyl-CoA carboxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BA9B3
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:ESX80741.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_500_bf_scaffold_2506_curated_15
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14819..15202)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DC27_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EDQ32345.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
PilT protein domain-containing protein
SCNpilot_cont_500_bf_scaffold_2506_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15199..15582)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0L4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53481.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AbrB family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2506_curated_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15657..15953)
DNA (297bp) protein (99aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Isovaleryl-CoA dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MI76_9RHIZ
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EXL10032.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_500_bf_scaffold_2506_curated_18
unknown

Not on your lists

16156..16263
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2506_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16774..17403)
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0L6_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHK53483.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2506_curated_20
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17570..17848
DNA (279bp) protein (93aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRZ5_9RHIZ
SCNpilot_cont_500_bf_scaffold_2506_curated_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17870..18997)
DNA (1128bp) protein (376aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y983_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EHH11701.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K13590 diguanylate cyclase rbh
SCNpilot_cont_500_bf_scaffold_2506_curated_22
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19223..20149
DNA (927bp) protein (309aa)
Putative N-acetyltransferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNR9_RHISN
N-acetyltransferase
Putative N-acetyltransferase {ECO:0000313|EMBL:ACP21727.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_500_bf_scaffold_2506_curated_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20191..21303)
DNA (1113bp) protein (371aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Aminotransferase class I and II n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMK5_MESCW
Aminotransferase class I and II {ECO:0000313|EMBL:ADV13950.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2506_curated_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21428..21976
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00037F99C7
Uncharacterized protein {ECO:0000313|EMBL:GAO38858.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2506_curated_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22004..22360)
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Alkylhydroperoxidase AhpD core n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFU5_NITHX
alkylhydroperoxidase AhpD core
SCNpilot_cont_500_bf_scaffold_2506_curated_26
unknown

Not on your lists

comp(22440..22589)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2506_curated_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22833..23261
DNA (429bp) protein (143aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003782FF9
DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX53611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_500_bf_scaffold_2506_curated_28
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23278..23808
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AYQ3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56269.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_2506_curated_29
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23830..24120)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VMP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ18895.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2506_curated_30
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24232..24747
DNA (516bp) protein (172aa)
SEC-independent protein translocase protein TatC n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MW9_MESSB
Preprotein translocase subunit TatC {ECO:0000313|EMBL:EZQ15510.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SEC-independent protein translocase protein TatC; K06886 hemoglobin
Displaying items 1-30 of 35 in total

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