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SCNpilot_cont_500_bf_scaffold_2299_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2299_curated_1
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..945
DNA (945bp) protein (315aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI000369D733
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACL09859.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
SCNpilot_cont_500_bf_scaffold_2299_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1144..1890
DNA (747bp) protein (249aa)
Methyltransferase FkbM n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137J8_RHOPS
methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:ABE39741.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_2299_curated_3
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1939..3060)
DNA (1122bp) protein (374aa)
Acyltransferase 3 n=1 Tax=Burkholderia sp. YI23 RepID=G8M6Y0_9BURK
Acyltransferase 3 {ECO:0000313|EMBL:BAO87200.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
acyltransferase 3
SCNpilot_cont_500_bf_scaffold_2299_curated_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3287..4696)
DNA (1410bp) protein (470aa)
Putative Macrocin-O-methyltransferase domain protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXM7_AZOC5
macrocin-O-methyltransferase domain-containing protein
Putative Macrocin-O-methyltransferase domain protein {ECO:0000313|EMBL:BAF87517.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_2299_curated_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5783..6022)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JE80_AGRRK
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:EZQ17743.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_500_bf_scaffold_2299_curated_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6074..6313)
DNA (240bp) protein (80aa)
XRE family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI0003787094
Uncharacterized protein {ECO:0000313|EMBL:CDM60326.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
putative transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_2299_curated_7
unknown

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7634..7900
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2299_curated_8
unknown

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comp(8179..8454)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2299_curated_9
unknown

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8600..8905
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2299_curated_10
Acidithiobacillus phage AcaML1, Caudovirales, Viruses

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comp(9744..11996)
DNA (2253bp) protein (751aa)
Uncharacterized protein n=2 Tax=root RepID=C6NTN9_9GAMM
Putative DNA primase {ECO:0000313|EMBL:AFU62862.1}; TaxID=1229761 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Acidithiobacillus phage AcaML1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2299_curated_11
unknown

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comp(11998..12216)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCJ3_9RHIZ
SCNpilot_cont_500_bf_scaffold_2299_curated_12
unknown

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comp(12315..12851)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2299_curated_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12901..13137)
DNA (237bp) protein (79aa)
Putative phage integrase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RL77_9RHOB
Integrase {ECO:0000313|EMBL:KJB91322.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative phage integrase
Displaying 13 items

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