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SCNpilot_cont_500_bf_scaffold_7183_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7183_curated_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..834
DNA (834bp) protein (278aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR5_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KGD96637.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
oligopeptide ABC transporter, permease protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_7183_curated_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..1691
DNA (531bp) protein (177aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR6_9RHIZ
Peptide ABC transporter {ECO:0000313|EMBL:KGD96638.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_7183_curated_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1691..2761
DNA (1071bp) protein (357aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPX9_9RHIZ
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:CDN58093.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7183_curated_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2758..3660
DNA (903bp) protein (301aa)
ABC transporter-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPX8_9RHIZ
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:CDN58094.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
ABC transporter-like protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7183_curated_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3703..5253
DNA (1551bp) protein (517aa)
Alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
Alpha-L-arabinofuranosidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR9_9RHIZ
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KGD96639.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_7183_curated_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5278..6207)
DNA (930bp) protein (310aa)
Putative DNA-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPY4_9RHIZ
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDN58096.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
celI; transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_7183_curated_7
unknown

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comp(6495..6710)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7183_curated_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7122..7631)
DNA (510bp) protein (170aa)
Hsp20/alpha crystallin family protein n=2 Tax=Ochrobactrum intermedium RepID=C4WQV8_9RHIZ
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDX27839.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
molecular chaperone small heat shock protein, hsp20 family; K13993 HSP20 family protein
SCNpilot_cont_500_bf_scaffold_7183_curated_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7730..8269)
DNA (540bp) protein (180aa)
Small heat shock protein hspD n=3 Tax=Ochrobactrum intermedium RepID=C4WQV9_9RHIZ
Small heat shock protein hspD {ECO:0000313|EMBL:EEQ94618.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hspB2; small heat shock protein HspB; K04080 molecular chaperone IbpA
SCNpilot_cont_500_bf_scaffold_7183_curated_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8431..8649
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D8E23
hypothetical protein
Msr2388 protein {ECO:0000313|EMBL:BAB49532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_7183_curated_11
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8779..9111
DNA (333bp) protein (111aa)
UPI0003CE9EC7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC7
Uncharacterized protein {ECO:0000313|EMBL:ESY74199.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7183_curated_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9095..9370)
DNA (276bp) protein (92aa)
UPI0003D06AEA related cluster n=1 Tax=unknown RepID=UPI0003D06AEA
Protein usg {ECO:0000313|EMBL:EZQ14103.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7183_curated_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9392..9736)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZW0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX22203.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7183_curated_14
unknown

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comp(9914..10081)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 14 items

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