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SCNpilot_cont_500_bf_scaffold_23716_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_23716_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..151
DNA (150bp) protein (50aa)
FAD dependent oxidoreductase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WU99_9BRAD
FAD dependent oxidoreductase {ECO:0000313|EMBL:EAQ36443.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
FAD dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_23716_curated_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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834..1196
DNA (363bp) protein (121aa)
ribosomal L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ20_NITWN
SCNpilot_cont_500_bf_scaffold_23716_curated_3
unknown

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comp(1303..1497)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_23716_curated_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2979..3518
DNA (540bp) protein (180aa)
peptidase M24 (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 {ECO:0000313|EMBL:ABA05622.1}; EC=3.4.11.9 {ECO:0000313|EMBL:ABA05622.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Peptidase M24 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ19_NITWN
SCNpilot_cont_500_bf_scaffold_23716_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3732..4205)
DNA (474bp) protein (158aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY6_9BRAD
SCNpilot_cont_500_bf_scaffold_23716_curated_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4218..4556)
DNA (339bp) protein (113aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY6_9BRAD
Displaying 6 items

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