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SCNpilot_cont_500_bf_scaffold_9275_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9275_curated_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
Carboxyl esterase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKY8_9BRAD
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC45940.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_9275_curated_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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916..2004
DNA (1089bp) protein (363aa)
poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Blr2885 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R87_BRADU
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:EJZ32749.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_9275_curated_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2001..2600
DNA (600bp) protein (200aa)
Blr2886 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R86_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR60057.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_500_bf_scaffold_9275_curated_4
unknown

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3273..3971
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9275_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4338..5489)
DNA (1152bp) protein (384aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
3-dehydroquinate synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EF8_RHOPS
SCNpilot_cont_500_bf_scaffold_9275_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6264..6410
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BY0_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86106.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_9275_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6453..7430
DNA (978bp) protein (326aa)
tyrosine recombinase XerD n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037E5FD5
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_9275_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7659..8369
DNA (711bp) protein (237aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudom
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EF4_RHOPS
Displaying 8 items

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