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SCNpilot_cont_500_bf_scaffold_2415_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2415_curated_1
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1685)
DNA (1683bp) protein (561aa)
kdpB; P-type ATPase, high-affinity potassium transport system, B chain, a phophatase-like domain (EC:3.6.3.9)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source
Potassium-transporting ATPase B chain n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q3F4_9RHIZ
SCNpilot_cont_500_bf_scaffold_2415_curated_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2294..2494
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI73857.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
SCNpilot_cont_500_bf_scaffold_2415_curated_3
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2528..2788
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDFB
Uncharacterised protein {ECO:0000313|EMBL:CRE04857.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_500_bf_scaffold_2415_curated_4
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2867..3013
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI73855.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
SCNpilot_cont_500_bf_scaffold_2415_curated_5
unknown

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comp(3466..3555)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2415_curated_6
unknown

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comp(3566..3769)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2415_curated_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4071..4760)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000367D3D4
Integrase {ECO:0000313|EMBL:CDX42518.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_2415_curated_8
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5410..6309)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0D9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ02230.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
putative isocitrate lyase-family protein,putative carboxyvinyl-carboxyphosphonate phosphorylmutase
SCNpilot_cont_500_bf_scaffold_2415_curated_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6541..8109
DNA (1569bp) protein (523aa)
Acid--CoA ligase {ECO:0000313|EMBL:KJR63365.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Citrate synthase id=4840593 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AMP-dependent synthetase/ligase
SCNpilot_cont_500_bf_scaffold_2415_curated_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8193..9308
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AS2_MESSB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJR63023.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
acyl-CoA dehydrogenase-like
SCNpilot_cont_500_bf_scaffold_2415_curated_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9322..10203
DNA (882bp) protein (294aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR63024.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Branched-chain amino acid ABC transporter, membrane protein id=3298096 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2415_curated_12
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10200..11159
DNA (960bp) protein (320aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A243_DEIPD
Uncharacterized protein {ECO:0000313|EMBL:KJR63366.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
branched-chain amino acid ABC transporter permease
SCNpilot_cont_500_bf_scaffold_2415_curated_13
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11163..11897
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037565DC
Uncharacterized protein {ECO:0000313|EMBL:KJR63367.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2415_curated_14
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11894..12616
DNA (723bp) protein (241aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6QB16_PYROT
Uncharacterized protein {ECO:0000313|EMBL:KJR63025.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
branched-chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2415_curated_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12630..13793
DNA (1164bp) protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR63026.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
thiolase, C-terminal domain-containing protein 8 id=14425587 bin=bin1_lowGC species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative thiolase
SCNpilot_cont_500_bf_scaffold_2415_curated_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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13795..14217
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002FE1839
hypothetical protein; K07068
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_500_bf_scaffold_2415_curated_17
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14241..15446
DNA (1206bp) protein (402aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR63028.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Extracellular ligand-binding receptor id=3298093 bin=GWF2_Methylomirabilis_70_14 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2415_curated_18
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15446..16213
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003815498
Uncharacterized protein {ECO:0000313|EMBL:KJR63029.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_500_bf_scaffold_2415_curated_19
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16206..17033
DNA (828bp) protein (276aa)
Amidohydrolase 2 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AS4_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KJR63030.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
amidohydrolase 2
SCNpilot_cont_500_bf_scaffold_2415_curated_20
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17141..17788
DNA (648bp) protein (216aa)
GntR domain protein n=2 Tax=Micromonospora RepID=D9T044_MICAI
GntR domain-containing protein
GntR domain protein {ECO:0000313|EMBL:ADL47280.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_500_bf_scaffold_2415_curated_21
unknown

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comp(17760..18143)
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2415_curated_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18140..18490)
DNA (351bp) protein (117aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIZ1_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:CCV16400.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2415_curated_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18846..19793)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AI1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65594.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 23 items

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