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SCNpilot_cont_500_bf_scaffold_4189_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4189_curated_1
unknown

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(559..2391)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTB4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX13021.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
HerA-ATP synthase, barrel domain; K06915
SCNpilot_cont_500_bf_scaffold_4189_curated_3
unknown

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comp(2479..2694)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3023..4573
DNA (1551bp) protein (517aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003635D87
SCNpilot_cont_500_bf_scaffold_4189_curated_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4905..5180
DNA (276bp) protein (92aa)
ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ABG62885.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABG62885.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Acetolactate synthase, small subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I90_MESSB
SCNpilot_cont_500_bf_scaffold_4189_curated_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5609..6877
DNA (1269bp) protein (423aa)
UPI0003CEA9F5 related cluster n=1 Tax=unknown RepID=UPI0003CEA9F5
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CDX35180.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
SCNpilot_cont_500_bf_scaffold_4189_curated_7
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6771..7172)
DNA (402bp) protein (134aa)
UPI0003D61277 related cluster n=1 Tax=unknown RepID=UPI0003D61277
Uncharacterised protein {ECO:0000313|EMBL:CRE16023.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_500_bf_scaffold_4189_curated_8
unknown

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comp(7254..7514)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_9
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7725..8021)
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_500_bf_scaffold_4189_curated_10
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8595..9983
DNA (1389bp) protein (463aa)
UPI0003CF9137 related cluster n=1 Tax=unknown RepID=UPI0003CF9137
Multidrug transporter {ECO:0000313|EMBL:ESX45394.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_500_bf_scaffold_4189_curated_11
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10232..10696
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C40E5
oxidoreductase iron-sulfur binding subunit
Oxidoreductase iron-sulfur binding subunit {ECO:0000313|EMBL:BAJ82697.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_4189_curated_12
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10693..12984
DNA (2292bp) protein (764aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding {ECO:0000313|EMBL:EGO94320.1}; EC=1.3.99.16 {ECO:0000313|EMBL:EGO94320.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B11DE
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
SCNpilot_cont_500_bf_scaffold_4189_curated_13
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13122..14249
DNA (1128bp) protein (376aa)
UPI0003CECD92 related cluster n=1 Tax=unknown RepID=UPI0003CECD92
ATP-binding protein {ECO:0000313|EMBL:ESY23781.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_curated_14
unknown

Not on your lists

comp(14856..15134)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15368..15775)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MJG6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20855.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_curated_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15797..16633
DNA (837bp) protein (279aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] rbh
Pyridoxine 5'-phosphate synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHI3_9RHIZ
SCNpilot_cont_500_bf_scaffold_4189_curated_17
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16947..17228)
DNA (282bp) protein (94aa)
UPI0003CF0682 related cluster n=1 Tax=unknown RepID=UPI0003CF0682
Uncharacterized protein {ECO:0000313|EMBL:ESZ52679.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
SCNpilot_cont_500_bf_scaffold_4189_curated_18
unknown

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comp(17283..17423)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_19
unknown

Not on your lists

comp(17634..17774)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_20
unknown

Not on your lists

comp(17958..18170)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_21
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18334..18729
DNA (396bp) protein (132aa)
UPI0003CF37AA related cluster n=1 Tax=unknown RepID=UPI0003CF37AA
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
K+ transporter
SCNpilot_cont_500_bf_scaffold_4189_curated_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18968..19570
DNA (603bp) protein (201aa)
UPI0003D05E1C related cluster n=1 Tax=unknown RepID=UPI0003D05E1C
Membrane protein {ECO:0000313|EMBL:ESZ24179.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K09928 hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19570..19980
DNA (411bp) protein (137aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQP8_9RHIZ
SCNpilot_cont_500_bf_scaffold_4189_curated_24
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20059..20808
DNA (750bp) protein (250aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
signal peptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037827FD
SCNpilot_cont_500_bf_scaffold_4189_curated_25
unknown

Not on your lists

comp(20795..20929)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_curated_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21110..21457
DNA (348bp) protein (116aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
rncS; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
ribonuclease III n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035C15A7
Displaying 26 items

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