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SCNpilot_cont_500_bf_scaffold_12233_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12233_curated_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..386
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003133FEF
TetR family transcriptional regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_500_bf_scaffold_12233_curated_2
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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824..1687
DNA (864bp) protein (288aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AGT95164.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AGT95164.1};; TaxID=1136179 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis CCM2595.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030297FA
SCNpilot_cont_500_bf_scaffold_12233_curated_3
unknown

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comp(2012..2590)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12233_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2851..3309
DNA (459bp) protein (153aa)
long-chain fatty-acid-CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Putative long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:CAE25908.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CAE25908.1};; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376589A
SCNpilot_cont_500_bf_scaffold_12233_curated_5
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4081..4773
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS52603.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Uncharacterized protein id=3352312 bin=GWA2_Methylomirabilis_73_35 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SCNpilot_cont_500_bf_scaffold_12233_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6496..6777
DNA (282bp) protein (94aa)
Cell division topological specificity factor n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUH3_9BRAD
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
SCNpilot_cont_500_bf_scaffold_12233_curated_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7139..7315
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUH6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36364.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12233_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7523..7705)
DNA (183bp) protein (61aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) PF4_NITHX">RepID=Q1QPF4_NITHX
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ABE61893.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_12233_curated_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8285..8785
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D679_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL07347.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_12233_curated_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8839..9543)
DNA (705bp) protein (235aa)
Response regulator n=2 Tax=Oligotropha carboxidovorans RepID=B6JJK3_OLICO
response regulator protein
Response regulator protein {ECO:0000313|EMBL:AEI05365.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_12233_curated_11
unknown

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comp(9566..9733)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 11 items

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