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SCNpilot_cont_500_bf_scaffold_7161_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7161_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..499)
DNA (498bp) protein (166aa)
Carbohydrate-selective porin OprB n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRZ5_9BRAD
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:EAQ37246.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
carbohydrate-selective porin OprB
SCNpilot_cont_500_bf_scaffold_7161_curated_2
unknown

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comp(1903..2160)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7161_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2495..2692
DNA (198bp) protein (66aa)
Perplasmic binding protein of ABC transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR31_NITHX
perplasmic binding protein of ABC transporter
Perplasmic binding protein of ABC transporter {ECO:0000313|EMBL:ABE61316.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_7161_curated_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3027..3506
DNA (480bp) protein (160aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBM8_BRAJP
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHY56193.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_500_bf_scaffold_7161_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4789..5307
DNA (519bp) protein (173aa)
dihydrofolate reductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EAE118
Dehydrogenase {ECO:0000313|EMBL:KIZ35021.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
D-isomer specific 2-hydroxyacid dehydrogenase
SCNpilot_cont_500_bf_scaffold_7161_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5311..6012
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VG9_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04065.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_7161_curated_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6014..6217)
DNA (204bp) protein (68aa)
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000362CD9A
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP09747.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7161_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7680..7775)
DNA (96bp) protein (32aa)
Putative mutT/Nudix hydrolase family protein NADH pyrophosphatase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RW03_9BRAD
NUDIX hydrolase {ECO:0000313|EMBL:KIZ42513.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_500_bf_scaffold_7161_curated_9
unknown

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8122..8310
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 9 items

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