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SCNpilot_cont_500_bf_scaffold_3823_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3823_curated_1
unknown

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2..136
DNA (135bp) protein (45aa)
Branched-chain amino acid ABC transporter permease n=2 Tax=Labrenzia RepID=U7G0X2_9RHOB
SCNpilot_cont_500_bf_scaffold_3823_curated_2
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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140..1279
DNA (1140bp) protein (380aa)
Urea ABC transporter permease n=2 Tax=Labrenzia RepID=U7G010_9RHOB
Urea ABC transporter permease {ECO:0000313|EMBL:ERP90812.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
putative branched-chain amino acid transport permease component
SCNpilot_cont_500_bf_scaffold_3823_curated_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1283..2032
DNA (750bp) protein (250aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-); K01995 branched-chain amino acid transport system ATP-binding protein
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037758D8
Urea ABC transporter ATP-binding protein UrtD {ECO:0000313|EMBL:ERF84933.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_3823_curated_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2025..2720
DNA (696bp) protein (232aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein
Urea ABC transporter ATP-binding protein UrtE n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ96_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig184, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45466.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_3823_curated_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2761..3798
DNA (1038bp) protein (346aa)
Aliphatic amidase (AmiE) {ECO:0000313|EMBL:CDX14214.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CDX14214.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
amiE; acylamide amidohydrolase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4]
PREDICTED: probable nitrilase C965.09-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A616
SCNpilot_cont_500_bf_scaffold_3823_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3883..4722
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N490_9RHIZ
Protein CbbQ {ECO:0000313|EMBL:CDX35742.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
CbbQ/NirQ/NorQ C-terminal domain-containing protein; K04748 nitric oxide reductase NorQ protein
SCNpilot_cont_500_bf_scaffold_3823_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4775..7000
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PM77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX35739.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3823_curated_8
unknown

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comp(7229..7366)
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003145A1F
SCNpilot_cont_500_bf_scaffold_3823_curated_9
unknown

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comp(7641..8549)
DNA (909bp) protein (303aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3823_curated_10
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8533..9072)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0A3F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19038.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_3823_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9128..9364)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F91B92
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Displaying 11 items

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