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SCNpilot_cont_500_bf_scaffold_1868_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1868_curated_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20..1693
DNA (1674bp) protein (558aa)
respiratory-chain NADH dehydrogenase domain-containing protein; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NAD-dependent formate dehydrogenase flavoprotein subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FL3_MESSB
NAD-dependent formate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:ABG63812.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1695..4493
DNA (2799bp) protein (933aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
UPI0003CFFD25 related cluster n=1 Tax=unknown RepID=UPI0003CFFD25
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ESZ21468.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_1868_curated_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4846..5532)
DNA (687bp) protein (229aa)
UPI0003CE5EF6 related cluster n=1 Tax=unknown RepID=UPI0003CE5EF6
Transcriptional regulator {ECO:0000313|EMBL:ESY67344.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transcriptional regulator, GntR family
SCNpilot_cont_500_bf_scaffold_1868_curated_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5659..6579
DNA (921bp) protein (307aa)
UPI0003CE7EC3 related cluster n=1 Tax=unknown RepID=UPI0003CE7EC3
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY67343.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative polar amino acid ABC transporter, substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1868_curated_5
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6596..7336
DNA (741bp) protein (247aa)
UPI0003CF0AFC related cluster n=1 Tax=unknown RepID=UPI0003CF0AFC
ABC transporter permease {ECO:0000313|EMBL:ESY67342.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative polar amino acid ABC transporter, permease protein
SCNpilot_cont_500_bf_scaffold_1868_curated_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7341..8138
DNA (798bp) protein (266aa)
UPI0003CDE1D0 related cluster n=1 Tax=unknown RepID=UPI0003CDE1D0
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY67341.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative polar amino acid ABC transporter, ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1868_curated_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8264..9460
DNA (1197bp) protein (399aa)
UPI0003CEC3FA related cluster n=1 Tax=unknown RepID=UPI0003CEC3FA
Cytochrome C4 {ECO:0000313|EMBL:ESY67340.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
FAD dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_1868_curated_8
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10275..10754
DNA (480bp) protein (160aa)
Arsenical-resistance protein ACR3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ3_PELHB
arsenical-resistance protein ACR3; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:AEQ52776.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10758..11960
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3V0_OCHA4
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS15904.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12231..12845)
DNA (615bp) protein (205aa)
Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG7_NITHX
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE61880.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12865..13737)
DNA (873bp) protein (291aa)
PDZ/DHR/GLGF protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG8_NITHX
hypothetical protein
PDZ/DHR/GLGF protein {ECO:0000313|EMBL:ABE61879.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13920..14876
DNA (957bp) protein (319aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM58_NITHX
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABE62689.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14962..15348)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6L5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ13103.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1868_curated_14
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15617..16219)
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G24_MESSB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABG63651.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1868_curated_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16266..16613)
DNA (348bp) protein (116aa)
Cytochrome c, class I n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6I9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16771.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cytochrome c, class I
SCNpilot_cont_500_bf_scaffold_1868_curated_16
unknown

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comp(16639..16812)
DNA (174bp) protein (58aa)
Putative attachment-related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N675_9RHIZ
SCNpilot_cont_500_bf_scaffold_1868_curated_17
unknown

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comp(16796..16969)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 17 items

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