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SCNpilot_cont_500_bf_scaffold_5418_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5418_curated_1
unknown

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3..92
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5418_curated_2
unknown

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comp(453..698)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5418_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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949..1098
DNA (150bp) protein (50aa)
hypothetical protein; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39609.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_5418_curated_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1484..2260
DNA (777bp) protein (259aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W9Z0_9BRAD
SCNpilot_cont_500_bf_scaffold_5418_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2257..3123
DNA (867bp) protein (289aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000255|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; TaxID=316056 species="Bacteria; Proteobacteria
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RSMA_RHOPB rbh
SCNpilot_cont_500_bf_scaffold_5418_curated_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3136..4194
DNA (1059bp) protein (353aa)
NAD-dependent alcohol dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003046855
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45932.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_500_bf_scaffold_5418_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4385..5749
DNA (1365bp) protein (455aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUB4_RHOP2
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:KIZ45516.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
peptidase C14, caspase catalytic subunit p20
SCNpilot_cont_500_bf_scaffold_5418_curated_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6776..6949
DNA (174bp) protein (58aa)
Bll4090 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MV2_BRADU
hypothetical protein
Bll4090 protein {ECO:0000313|EMBL:BAC49355.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_500_bf_scaffold_5418_curated_9
unknown

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comp(7601..7687)
DNA (87bp) protein (29aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030E0B22
Displaying 9 items

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