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SCNpilot_cont_500_bf_scaffold_8102_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8102_curated_1
unknown

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comp(83..250)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8102_curated_2
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(307..705)
DNA (399bp) protein (133aa)
Uncharacterised protein {ECO:0000313|EMBL:CRD79259.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_500_bf_scaffold_8102_curated_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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839..1366
DNA (528bp) protein (176aa)
Chromate transport protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS9_9RHIZ
Chromate transport protein {ECO:0000313|EMBL:EKF42294.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
chromate transport protein; K07240 chromate transporter
SCNpilot_cont_500_bf_scaffold_8102_curated_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(2280..2720)
DNA (441bp) protein (147aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
SCNpilot_cont_500_bf_scaffold_8102_curated_5
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(2805..3161)
DNA (357bp) protein (119aa)
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
SCNpilot_cont_500_bf_scaffold_8102_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3241..3444
DNA (204bp) protein (68aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2N4I1_9RHIZ
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKF42293.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_8102_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3704..4483)
DNA (780bp) protein (260aa)
budC; acetoin(diacetyl) reductase; K03366 (R,R)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.303]
Acetoin(Diacetyl) reductase n=1 Tax=Nitratireductor indicus C115 RepID=K2PMI0_9RHIZ
Acetoin(Diacetyl) reductase {ECO:0000313|EMBL:EKF42292.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_8102_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5837..5989
DNA (153bp) protein (51aa)
Pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00520 mercuric reductase [EC:1.16.1.1]
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Nitratireductor indicus C115 RepID=K2P4J2_9RHIZ
Pyridine nucleotide-disulfide oxidoreductase dimerization region {ECO:0000313|EMBL:EKF42291.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_8102_curated_9
unknown

Not on your lists

6152..6823
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8102_curated_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6719..7003)
DNA (285bp) protein (95aa)
KLTH0D05698p id=24470348 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lachancea thermotolerans genus=Lachancea taxon_order=Saccharomycetales taxon_class=Saccharomycetes phylum=Ascomycota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:CEG07156.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_500_bf_scaffold_8102_curated_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7335..7565
DNA (231bp) protein (77aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Cation transport ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSI0_9RHIZ
Cation transport ATPase {ECO:0000313|EMBL:EKF42290.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Displaying 11 items

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