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SCNpilot_cont_500_bf_scaffold_1804_curated

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1804_curated_1
bacterium YEK0313, Bacteria

Not on your lists

191..706
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036CBC0C
Transcriptional regulator HosA {ECO:0000313|EMBL:CEJ15239.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1804_curated_2
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

725..2440
DNA (1716bp) protein (572aa)
acetolactate synthase I/II/III large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Possible thiamine pyrophosphate enzyme n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIT6_MOBAS
Possible thiamine pyrophosphate enzyme {ECO:0000313|EMBL:EAS50031.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2589..3635
DNA (1047bp) protein (349aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF2_MESSB
TRAP dicarboxylate transporter-DctP subunit
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ABG63873.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3905..4210
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63874.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_5
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4521..5540
DNA (1020bp) protein (340aa)
Putative TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIT3_MOBAS
Putative TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EAS50034.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
TRAP dicarboxylate transporter subunit DctM
SCNpilot_cont_500_bf_scaffold_1804_curated_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5509..6327)
DNA (819bp) protein (273aa)
Probable transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HW2_RHILO
AraC family transcriptional regulator {ECO:0000313|EMBL:EWY41551.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1804_curated_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6444..7697
DNA (1254bp) protein (418aa)
Fosmidomycin resistance protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035EB6BA
Fosmidomycin resistance protein {ECO:0000313|EMBL:EWY41552.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
fsr; fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein
SCNpilot_cont_500_bf_scaffold_1804_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7702..8394)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FEB2E
Hly-III family protein {ECO:0000313|EMBL:EHK58385.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hemolysin III, novel hemolytic factor; K11068 hemolysin III
SCNpilot_cont_500_bf_scaffold_1804_curated_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8457..16184)
DNA (7728bp) protein (2576aa)
UPI0003CE7814 related cluster n=1 Tax=unknown RepID=UPI0003CE7814
Membrane protein {ECO:0000313|EMBL:ESY79662.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
alpha-2-macroglobulin domain-containing protein; K06894
SCNpilot_cont_500_bf_scaffold_1804_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16273..16941)
DNA (669bp) protein (223aa)
TonB family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N7L4_9RHIZ
TonB family protein {ECO:0000313|EMBL:EKF43468.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_cont_500_bf_scaffold_1804_curated_11
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18503)
DNA (795bp) protein (265aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GL6_MESSB
ABC transporter related protein {ECO:0000313|EMBL:ABG63459.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18503..19492)
DNA (990bp) protein (330aa)
Transport system permease protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GL7_MESSB
transport system permease protein; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ABG63458.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19489..19968)
DNA (480bp) protein (160aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GL8_MESSB
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABG63457.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1804_curated_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20577..22439)
DNA (1863bp) protein (621aa)
TonB-dependent receptor n=1 Tax=Nitratireductor indicus C115 RepID=K2NZU5_9RHIZ
TonB-dependent receptor {ECO:0000313|EMBL:EKF43464.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_500_bf_scaffold_1804_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23038..24699
DNA (1662bp) protein (554aa)
UPI0003D00617 related cluster n=1 Tax=unknown RepID=UPI0003D00617
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDX62719.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
family 5 extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_1804_curated_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24830..25864
DNA (1035bp) protein (345aa)
UPI0003CF35FC related cluster n=1 Tax=unknown RepID=UPI0003CF35FC
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX13402.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1804_curated_17
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26239..27033
DNA (795bp) protein (265aa)
Peptide ABC transporter permease n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MJ50_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:EKF20720.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCNpilot_cont_500_bf_scaffold_1804_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27047..29872
DNA (2826bp) protein (942aa)
ATP-binding protein of dipeptide ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ4_9RHIZ
ATP-binding protein of dipeptide ABC transporter {ECO:0000313|EMBL:EHK55890.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1804_curated_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29883..30554
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS77_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37127.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein; K06927
SCNpilot_cont_500_bf_scaffold_1804_curated_20
unknown

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30561..31091
DNA (531bp) protein (177aa)
Putative lipoprotein n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T355_THEA1
putative lipoprotein
SCNpilot_cont_500_bf_scaffold_1804_curated_21
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32018..32665
DNA (648bp) protein (216aa)
Putative multidrug resistance protein efflux transporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLH6_MOBAS
Putative multidrug resistance protein efflux transporter {ECO:0000313|EMBL:EAS51755.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
multidrug and toxin extrusion (MATE) family efflux pump
SCNpilot_cont_500_bf_scaffold_1804_curated_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32692..33282)
DNA (591bp) protein (197aa)
Lytic transglycosylase catalytic n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDN4_MESOW
lytic transglycosylase catalytic subunit
Uncharacterized protein {ECO:0000313|EMBL:CDX29787.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_1804_curated_23
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33520..35058
DNA (1539bp) protein (513aa)
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
UPI0003CF6542 related cluster n=1 Tax=unknown RepID=UPI0003CF6542
Methyltransferase {ECO:0000313|EMBL:ESW88867.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_1804_curated_24
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35181..37607
DNA (2427bp) protein (809aa)
FAD dependent oxidoreductase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4]
UPI0003CF33BD related cluster n=1 Tax=unknown RepID=UPI0003CF33BD
Glycine cleavage system protein T {ECO:0000313|EMBL:ESY79671.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_1804_curated_25
unknown

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comp(37763..38020)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1804_curated_26

Not on your lists

38070..38297
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQT1_RHISN
Uncharacterized protein {ECO:0000313|EMBL:KKN96267.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_1804_curated_27
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38352..39032
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FW77_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78713.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_1804_curated_28
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39042..39437)
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNP6_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ01747.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_cont_500_bf_scaffold_1804_curated_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39586..40359)
DNA (774bp) protein (258aa)
Mlr1649 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98K41_RHILO
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDX13384.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K06996 rbh
SCNpilot_cont_500_bf_scaffold_1804_curated_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40392..40871)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RW0_RHOP5
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ABJ05324.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Displaying items 1-30 of 86 in total

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