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scnpilot_cont_500_p_scaffold_1111

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1111_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
Aspartate aminotransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVF3_RHITR
aspC; aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AGB74686.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
scnpilot_cont_500_p_scaffold_1111_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..1829)
DNA (1533bp) protein (511aa)
Piperideine-6-carboxylic acid dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTX4_RHITR rbh
piperideine-6-carboxylic acid dehydrogenase
Piperideine-6-carboxylic acid dehydrogenase {ECO:0000313|EMBL:AGB74687.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
scnpilot_cont_500_p_scaffold_1111_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1887..3281)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTS3_RHITR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74688.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_cont_500_p_scaffold_1111_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3392..4294
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX03_RHITR rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB74689.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
scnpilot_cont_500_p_scaffold_1111_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4400..4711
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L8S7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29449.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
hypothetical protein
scnpilot_cont_500_p_scaffold_1111_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4952..6043
DNA (1092bp) protein (364aa)
Putative monooxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U6F8_9RHIZ rbh
Putative monooxygenase {ECO:0000313|EMBL:ENN88184.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source
alkanesulfonate monooxygenase
scnpilot_cont_500_p_scaffold_1111_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6436..7119
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX51_RHITR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74695.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_cont_500_p_scaffold_1111_8
unknown

Not on your lists

7169..7330
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1111_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7293..8132)
DNA (840bp) protein (280aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVG3_RHITR rbh
small-conductance mechanosensitive channel rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AGB74696.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
scnpilot_cont_500_p_scaffold_1111_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..9724)
DNA (1470bp) protein (490aa)
GGDEF domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTY1_RHITR rbh
GGDEF domain-containing protein
GGDEF domain-containing protein {ECO:0000313|EMBL:AGB74697.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
scnpilot_cont_500_p_scaffold_1111_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9943..10392)
DNA (450bp) protein (150aa)
Iron dependent repressor, DtxR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTT1_RHITR
iron dependent repressor, DtxR family
Iron dependent repressor, DtxR family {ECO:0000313|EMBL:AGB74698.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
scnpilot_cont_500_p_scaffold_1111_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10498..11613)
DNA (1116bp) protein (372aa)
Alkanesulfonate monooxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX11_RHITR rbh
alkanesulfonate monooxygenase
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:AGB74699.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
scnpilot_cont_500_p_scaffold_1111_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12553)
DNA (855bp) protein (285aa)
Putative taurine ABC transporter, permease protein TauC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX57_RHITR rbh
putative taurine ABC transporter, permease protein TauC
Putative taurine ABC transporter, permease protein TauC {ECO:0000313|EMBL:AGB74700.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
scnpilot_cont_500_p_scaffold_1111_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..13338)
DNA (789bp) protein (263aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Putative taurine ABC transporter, ATP-binding protein TauB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVG8_RHITR rbh
putative taurine ABC transporter, ATP-binding protein TauB
scnpilot_cont_500_p_scaffold_1111_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13396..14409)
DNA (1014bp) protein (338aa)
Putative taurine ABC transporter, substrate-binding protein TauA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTY5_RHITR rbh
putative taurine ABC transporter, substrate-binding protein TauA
Putative taurine ABC transporter, substrate-binding protein TauA {ECO:0000313|EMBL:AGB74702.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
scnpilot_cont_500_p_scaffold_1111_16
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14786..15019)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HNX1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPE99665.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_cont_500_p_scaffold_1111_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15625..16431
DNA (807bp) protein (269aa)
Probable DNA repair protein RTCIAT899_PC09425 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY95_RHITR rbh
putative DNA repair protein rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
scnpilot_cont_500_p_scaffold_1111_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16470..19040)
DNA (2571bp) protein (857aa)
DNA ligase D n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0M010_RHITR rbh
DNA ligase D {ECO:0000313|EMBL:AGB75670.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobiu
DNA ligase D
scnpilot_cont_500_p_scaffold_1111_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19043..19915)
DNA (873bp) protein (291aa)
Probable DNA repair protein RTCIAT899_PC09415 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZW2_RHITR rbh
putative DNA repair protein rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
scnpilot_cont_500_p_scaffold_1111_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20046..21128
DNA (1083bp) protein (361aa)
DNA topoisomerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK41_RHITR rbh
DNA topoisomerase rbh
DNA topoisomerase {ECO:0000313|EMBL:AGB71778.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
scnpilot_cont_500_p_scaffold_1111_21
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21262..22836)
DNA (1575bp) protein (525aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
Catalase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JMT1_AGRRK rbh
catalase
Displaying 21 items

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