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scnpilot_cont_500_p_scaffold_1145

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1145_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..468)
DNA (468bp) protein (156aa)
Ribose transport system permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2K2_9RHIZ
Ribose transport system permease protein {ECO:0000313|EMBL:ENN88060.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
branched-chain amino acid transport system / permease component family protein
scnpilot_cont_500_p_scaffold_1145_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..2009)
DNA (1545bp) protein (515aa)
Ribose import ATP-binding protein rbsA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4N5_9RHIZ rbh
Ribose import ATP-binding protein rbsA {ECO:0000313|EMBL:ENN88061.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_1145_3
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2159..3061)
DNA (903bp) protein (301aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X293_9RHIZ rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI14924.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="
monosaccharide-transporting ATPase
scnpilot_cont_500_p_scaffold_1145_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..4446
DNA (1029bp) protein (343aa)
Periplasmic binding protein/LacI transcriptional regulator/transcriptional repressor RbsR n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UD34_9RHIZ rbh
Periplasmic binding protein/LacI transcriptional regulator/transcriptional repressor RbsR {ECO:0000313|EMBL:ENN88063.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
putative transcriptional regulator protein, LacI family
scnpilot_cont_500_p_scaffold_1145_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..5480
DNA (735bp) protein (245aa)
Bacterial regulatory protein, GntR family protein 58 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVB4_ACHXA rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGY26777.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1145_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6341
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVB3_ACHXA rbh
Permease {ECO:0000313|EMBL:KGY26776.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxyda
hypothetical protein
scnpilot_cont_500_p_scaffold_1145_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6351..6671
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003047132
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP18685.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
scnpilot_cont_500_p_scaffold_1145_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6788..8017)
DNA (1230bp) protein (410aa)
UPI0003CEC200 related cluster n=1 Tax=unknown RepID=UPI0003CEC200 rbh
Gluconate 2-dehydrogenase (Acceptor)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:CDN50851.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizo
scnpilot_cont_500_p_scaffold_1145_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..9780)
DNA (1767bp) protein (589aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhizobium sp. CF080 RepID=J2K3H7_9RHIZ rbh
Gluconate 2-dehydrogenase flavoprotein
Gluconate 2-dehydrogenase flavoprotein {ECO:0000313|EMBL:CDN56999.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhi
scnpilot_cont_500_p_scaffold_1145_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9791..10546)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CMX5_9RHIZ rbh
Gluconate 2-dehydrogenase gamma chain rbh
Gluconate 2-dehydrogenase gamma chain {ECO:0000313|EMBL:CDN56998.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhiz
scnpilot_cont_500_p_scaffold_1145_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11050..14145)
DNA (3096bp) protein (1032aa)
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT95_RHITR rbh
resistance nodulation cell division (RND) drug efflux pump, inner membrane component
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB73916.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rh
scnpilot_cont_500_p_scaffold_1145_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14142..15344)
DNA (1203bp) protein (401aa)
Resistance nodulation cell division (RND) drug efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUV4_RHITR rbh
resistance nodulation cell division (RND) drug efflux pump, MFP component rbh
Resistance nodulation cell division (RND) drug efflux pump, MFP component {ECO:0000313|EMBL:AGB73915.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
scnpilot_cont_500_p_scaffold_1145_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15484..16155)
DNA (672bp) protein (224aa)
Two-component response regulator protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUT1_RHITR rbh
two-component response regulator protein
Two-component response regulator protein {ECO:0000313|EMBL:AGB73914.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
scnpilot_cont_500_p_scaffold_1145_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16291..16974
DNA (684bp) protein (228aa)
Two component transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7B2_9RHIZ rbh
Two component transcriptional regulator {ECO:0000313|EMBL:ENN89720.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh
two-component response regulator protein
scnpilot_cont_500_p_scaffold_1145_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16940..18304
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V948_9RHIZ rbh
two-component sensor histidine kinase protein
scnpilot_cont_500_p_scaffold_1145_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18498..19403)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7A0_OCHA4 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDP74201.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensife
bacterial regulatory helix-turn-helix , lysR family protein
scnpilot_cont_500_p_scaffold_1145_17
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19623..20579
DNA (957bp) protein (319aa)
dihydrodipicolinate synthetase n=1 Tax=Ochrobactrum anthropi RepID=UPI0002896787 rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KDP74200.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" so
dihydrodipicolinate synthetase family protein
scnpilot_cont_500_p_scaffold_1145_18
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20602..21147
DNA (546bp) protein (182aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyan
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IW09_POLGS rbh
3-hydroxyanthranilate 3,4-dioxygenase
scnpilot_cont_500_p_scaffold_1145_19
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21216..22385
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=2 Tax=Ochrobactrum anthropi RepID=A6X797_OCHA4 rbh
periplasmic binding domain protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL03309.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactr
Displaying 19 items

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